RNA–Protein interactions for RNA: ENST00000589057.5

APOC4-APOC2-202, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene APOC4-APOC2, Length 680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-202ENST00000589057 SYNE3Q6ZMZ3 975 aa12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 EPHX3Q9H6B9 360 aa12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 RC3H2Q9HBD1 1191 aaKnown RBP12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 JPH1Q9HDC5 661 aaPredicted RBP12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 CD320Q9NPF0 282 aa12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 RIC8AQ9NPQ8 531 aa12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 RBM28Q9NW13 759 aaKnown RBP12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 SLC9A2Q9UBY0 812 aa12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 CDY2AQ9Y6F7 541 aa12.68□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 NFASCO94856 1347 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 STXBP3O00186 592 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ENPP3O14638 875 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ZBTB43O43298 467 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ARP10275 920 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 KCNA5P22460 613 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 NAPAP54920 295 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ACTR2P61160 394 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 IGBP1P78318 339 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 MRPS6P82932 125 aaKnown RBP12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ITGB3BPQ13352 177 aaPredicted RBP12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 RTN1Q16799 776 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 PTPROQ16827 1216 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 TSGA10IPQ3SY00 556 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 LEXMQ3ZCV2 418 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 PPP1R18Q6NYC8 613 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 DHX32Q7L7V1 743 aaKnown RBP12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 RSPH3Q86UC2 560 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 LINC01599Q8WXQ3 324 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 IL17RAQ96F46 866 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 C1QTNF1Q9BXJ1 281 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ANO3Q9BYT9 981 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 AGO3Q9H9G7 860 aaKnown RBP12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 TMEM260Q9NX78 707 aa12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 RRN3P2A6NIE6 340 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 C5orf67F2Z3F1 127 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ATG7O95352 703 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 FOSP01100 380 aaPredicted RBP12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 CDC27P30260 824 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 CLK2P49760 499 aaKnown RBP12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ADCY7P51828 1080 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 PLCB4Q15147 1175 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 TIGD5Q53EQ6 642 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 CEP55Q53EZ4 464 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 TSHZ1Q6ZSZ6 1077 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 FIBCD1Q8N539 461 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 BANK1Q8NDB2 785 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 TRAPPC12Q8WVT3 735 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ZNF689Q96CS4 500 aaPredicted RBP12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 FAM49AQ9H0Q0 323 aaPredicted RBP12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 AGO4Q9HCK5 861 aaKnown RBP12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 TRPC6Q9Y210 931 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 KIAA1671Q9BY89 1806 aa12.66□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ADGRA3Q8IWK6 1321 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 IGKV6D-21A0A0A0MT36 114 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 KLF18A0A0U1RQI7 1052 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 SMCO2A6NFE2 343 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 GOLGA8AA7E2F4 631 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 GOLGA8BA8MQT2 603 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 hCG_1984214I3L0E3 225 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 MEIS1O00470 390 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 CCNE2O96020 404 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 IL9P15248 144 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 CD52P31358 61 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 CTNNB1P35222 781 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 BMPR1AP36894 532 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 SREBF1P36956 1147 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 STAT5BP51692 787 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 COL19A1Q14993 1142 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 TCEAL5Q5H9L2 206 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 CENPQQ7L2Z9 268 aaPredicted RBP12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 PLPPR4Q7Z2D5 763 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 RTN4RL1Q86UN2 441 aaPredicted RBP12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 FAM178BQ8IXR5 827 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 CRIPAKQ8N1N5 446 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 ZNF713Q8N859 430 aaPredicted RBP12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 SDF4Q9BRK5 362 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 AZI2Q9H6S1 392 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 PCDHA2Q9Y5H9 948 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 SQORQ9Y6N5 450 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 MYO7AQ13402 2215 aa12.65□□□□□ -0.38
APOC4-APOC2-202ENST00000589057 H3BQ06 376 aaPredicted RBP12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 ADAMTS3O15072 1205 aa12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 GRM6O15303 877 aa12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 DGKIO75912 1065 aa12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 RPLP2P05387 115 aaKnown RBP12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 RB1P06400 928 aa12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 RCAN1P53805 252 aa12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 TMEM62Q0P6H9 643 aa12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 AP3B2Q13367 1082 aa12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 IER5Q5VY09 327 aa12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 PTCRAQ6ISU1 281 aaPredicted RBP12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 CLP1Q92989 425 aaKnown RBP12.64□□□□□ -0.39
APOC4-APOC2-202ENST00000589057 PABPC5Q96DU9 382 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms