RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 KCND2Q9NZV8 630 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 NKRFO15226 690 aaKnown RBP eCLIP16.84■□□□□ 0.29
MBD1-217ENST00000588937 FDX1P10109 184 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 BCRP11274 1271 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 H2AFXP16104 143 aaPredicted RBP16.84■□□□□ 0.29
MBD1-217ENST00000588937 RPL13P26373 211 aaKnown RBP16.84■□□□□ 0.29
MBD1-217ENST00000588937 USP14P54578 494 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 HERVK_113P62684 666 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 GHRHRQ02643 423 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 DCAF15Q66K64 600 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 RINT1Q6NUQ1 792 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 FRMD5Q7Z6J6 570 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 TPH2Q8IWU9 490 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 TXLNBQ8N3L3 684 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 GPR161Q8N6U8 529 aaKnown RBP16.84■□□□□ 0.29
MBD1-217ENST00000588937 JAKMIP2Q96AA8 810 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 HOOK2Q96ED9 719 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 DYDC2Q96IM9 177 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 RIT2Q99578 217 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 OLFML3Q9NRN5 406 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 GUCA1BQ9UMX6 200 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 ZNF536O15090 1300 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 EIF3DO15371 548 aaKnown RBP eCLIP16.84■□□□□ 0.29
MBD1-217ENST00000588937 FAM13AO94988 1023 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 NR2F2P24468 414 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 EPS15P42566 896 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 CTTNQ14247 550 aaKnown RBP16.84■□□□□ 0.29
MBD1-217ENST00000588937 SRGAP1Q7Z6B7 1085 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 RABGGTAQ92696 567 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 AGBL1Q96MI9 1066 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 RUSC1Q9BVN2 902 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 TYW1Q9NV66 732 aaKnown RBP16.84■□□□□ 0.29
MBD1-217ENST00000588937 CEP72Q9P209 647 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 SEL1LQ9UBV2 794 aa16.84■□□□□ 0.29
MBD1-217ENST00000588937 CTDP1Q9Y5B0 961 aaPredicted RBP16.84■□□□□ 0.29
MBD1-217ENST00000588937 RPTORQ8N122 1335 aa16.83■□□□□ 0.28
MBD1-217ENST00000588937 SHTN1A0MZ66 631 aa16.83■□□□□ 0.28
MBD1-217ENST00000588937 CHMP2AO43633 222 aa16.83■□□□□ 0.28
MBD1-217ENST00000588937 USO1O60763 962 aaKnown RBP16.83■□□□□ 0.28
MBD1-217ENST00000588937 UBXN2AP68543 259 aa16.83■□□□□ 0.28
MBD1-217ENST00000588937 WHAMMP3Q1A5X7 153 aa16.83■□□□□ 0.28
MBD1-217ENST00000588937 STXBP4Q6ZWJ1 553 aa16.83■□□□□ 0.28
MBD1-217ENST00000588937 RSRC2Q7L4I2 434 aaKnown RBP16.83■□□□□ 0.28
MBD1-217ENST00000588937 RRAGAQ7L523 313 aa16.83■□□□□ 0.28
MBD1-217ENST00000588937 MICALL2Q8IY33 904 aa16.83■□□□□ 0.28
MBD1-217ENST00000588937 SYN2Q92777 582 aaPredicted RBP16.83■□□□□ 0.28
MBD1-217ENST00000588937 DEF6Q9H4E7 631 aa16.83■□□□□ 0.28
MBD1-217ENST00000588937 METTL14Q9HCE5 456 aaKnown RBP16.83■□□□□ 0.28
MBD1-217ENST00000588937 RBBP6Q7Z6E9 1792 aaKnown RBP16.83■□□□□ 0.28
MBD1-217ENST00000588937 UBE4BO95155 1302 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 IPO5O00410 1097 aaKnown RBP16.82■□□□□ 0.28
MBD1-217ENST00000588937 GCNT3O95395 438 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 ARP10275 920 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 GMPSP49915 693 aaPredicted RBP16.82■□□□□ 0.28
MBD1-217ENST00000588937 VAV2P52735 878 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 KCNMA1Q12791 1236 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 KIF5AQ12840 1032 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 PDXDC1Q6P996 788 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 GPC2Q8N158 579 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 BAP1Q92560 729 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 UNC45AQ9H3U1 944 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 SLC38A10Q9HBR0 1119 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 OGFRQ9NZT2 677 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 ZNF541Q9H0D2 1346 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 LRRC53A6NM62 1247 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 SLC16A3O15427 465 aaKnown RBP16.82■□□□□ 0.28
MBD1-217ENST00000588937 ZBED4O75132 1171 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 CASP5P51878 434 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 CHMP4BP1P59074 171 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 B3GNT9Q6UX72 402 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 C1orf186Q6ZWK4 172 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 PIGOQ8TEQ8 1089 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 CLEC4DQ8WXI8 215 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 PARVGQ9HBI0 331 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 AS3MTQ9HBK9 375 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 ARMCX3Q9UH62 379 aaPredicted RBP16.82■□□□□ 0.28
MBD1-217ENST00000588937 CNOT7Q9UIV1 285 aaKnown RBP16.82■□□□□ 0.28
MBD1-217ENST00000588937 DDX41Q9UJV9 622 aaKnown RBP16.82■□□□□ 0.28
MBD1-217ENST00000588937 ODF2LQ9ULJ1 636 aa16.82■□□□□ 0.28
MBD1-217ENST00000588937 UTRNP46939 3433 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 FRMPD4Q14CM0 1322 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 SSU72P8A0A1W2PR75 194 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 EPHB6O15197 1021 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 PRPF6O94906 941 aaKnown RBP16.81■□□□□ 0.28
MBD1-217ENST00000588937 LCA5LO95447 670 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 ABL1P00519 1130 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 MYBP10242 640 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 TEX35Q5T0J7 233 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 SMCR8Q8TEV9 937 aaPredicted RBP16.81■□□□□ 0.28
MBD1-217ENST00000588937 ARID3AQ99856 593 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 LSM14BQ9BX40 385 aaKnown RBP16.81■□□□□ 0.28
MBD1-217ENST00000588937 HACL1Q9UJ83 578 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 PPP1R9AQ9ULJ8 1098 aa16.81■□□□□ 0.28
MBD1-217ENST00000588937 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 RSPH10B2B2RC85 870 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 POTEB2H3BUK9 544 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 AKR1B10O60218 316 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 FLOT1O75955 427 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 RSPH10BP0C881 870 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 EPB41P11171 864 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms