RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 CD276Q5ZPR3 534 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 GLB1LQ6UWU2 654 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 SH3RF2Q8TEC5 729 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 FBXW5Q969U6 566 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 ARHGAP20Q9P2F6 1191 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 ZDHHC9Q9Y397 364 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 GAPVD1Q14C86 1478 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 AQRO60306 1485 aaKnown RBP eCLIP6.43□□□□□ -1.387e-21■■■■□ 23.2
VMP1-205ENST00000587470 ACOT7O00154 380 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 KLHL18O94889 574 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 PPP2CBP62714 309 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 PPP2CAP67775 309 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 GUCY1A3Q02108 690 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 RASA3Q14644 834 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 ZXDCQ2QGD7 858 aaPredicted RBP6.43□□□□□ -1.38
VMP1-205ENST00000587470 PHF19Q5T6S3 580 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 SOGA3Q5TF21 947 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 ARHGAP36Q6ZRI8 547 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 C16orf59Q7L2K0 433 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 KBTBD2Q8IY47 623 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 TTC9BQ8N6N2 239 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 PCDH19Q8TAB3 1148 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 LOXL4Q96JB6 756 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 EXOC2Q96KP1 924 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 DEPDC7Q96QD5 511 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 SSBP3Q9BWW4 388 aaPredicted RBP6.43□□□□□ -1.38
VMP1-205ENST00000587470 CD244Q9BZW8 370 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 CATSPERZQ9NTU4 200 aa6.43□□□□□ -1.38
VMP1-205ENST00000587470 CLASP1Q7Z460 1538 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 ZNF839A8K0R7 811 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 ARVCFO00192 962 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 GSTA4O15217 222 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 B4GALT4O60513 344 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 KNG1P01042 644 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 BTBD8Q5XKL5 378 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 ARHGEF18Q6ZSZ5 1173 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 IGDCC4Q8TDY8 1250 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 GPR20Q99678 358 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 ZFP69BQ9UJL9 534 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 ADAM29Q9UKF5 820 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 SRPK3Q9UPE1 567 aa6.42□□□□□ -1.38
VMP1-205ENST00000587470 MRPS23Q9Y3D9 190 aaKnown RBP6.42□□□□□ -1.38
VMP1-205ENST00000587470 SYNJ1O43426 1573 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 FAM221BA6H8Z2 402 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 PYGMP11217 842 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 PDE6AP16499 860 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 GLRBP48167 497 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 ST5P78524 1137 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 ADAM17P78536 824 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 EP400NLQ6ZTU2 488 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 LIMS2Q7Z4I7 341 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 OSTM1Q86WC4 334 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 STPG3Q8N7X2 389 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 NUDT10Q8NFP7 164 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 KISS1RQ969F8 398 aaPredicted RBP6.41□□□□□ -1.38
VMP1-205ENST00000587470 NUDT11Q96G61 164 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 KCND1Q9NSA2 647 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 SNTG2Q9NY99 539 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 PPP4R1LQ9P1A2 415 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 PCDHA9Q9Y5H5 950 aa6.41□□□□□ -1.38
VMP1-205ENST00000587470 ABCC8Q09428 1581 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 HECW2Q9P2P5 1572 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 NPEPPSL1A6NEC2 478 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 INSRRP14616 1297 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 PTPN1P18031 435 aaKnown RBP6.4□□□□□ -1.38
VMP1-205ENST00000587470 EPHB4P54760 987 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 DBPQ10586 325 aaPredicted RBP6.4□□□□□ -1.38
VMP1-205ENST00000587470 CRY1Q16526 586 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 FAM47CQ5HY64 1035 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 Q6ZUG5 572 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 ZC3H7AQ8IWR0 971 aaKnown RBP6.4□□□□□ -1.38
VMP1-205ENST00000587470 CHST13Q8NET6 341 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 MKL1Q969V6 931 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 AJUBAQ96IF1 538 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 C1QTNF3Q9BXJ4 246 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 KRTAP3-1Q9BYR8 98 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 RIC8BQ9NVN3 520 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 MYRFQ9Y2G1 1151 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 ATP23Q9Y6H3 246 aa6.4□□□□□ -1.38
VMP1-205ENST00000587470 FAM90A27PA6NNH2 459 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 MAN2B1O00754 1011 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 EFCAB14O75071 495 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 CRTAMO95727 393 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 IL18BPO95998 194 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 AMY2AP04746 511 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 APPP05067 770 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 SRGAP2CP0DJJ0 459 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 AMY2BP19961 511 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 GJA4P35212 333 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 CPZQ66K79 652 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 PTRH1Q86Y79 214 aaKnown RBP6.39□□□□□ -1.39
VMP1-205ENST00000587470 C8orf49Q96NF6 230 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 SRPK1Q96SB4 655 aaKnown RBP6.39□□□□□ -1.39
VMP1-205ENST00000587470 DNAJC7Q99615 494 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 JADE2Q9NQC1 790 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 CBLCQ9ULV8 474 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 KIF13AQ9H1H9 1805 aa6.39□□□□□ -1.39
VMP1-205ENST00000587470 CCDC163A0A0D9SF12 145 aa6.38□□□□□ -1.39
VMP1-205ENST00000587470 H0Y858 1186 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms