RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PDILTQ8N807 584 aa16.72■□□□□ 0.27
NFIX-208ENST00000587260 BANK1Q8NDB2 785 aa16.72■□□□□ 0.27
NFIX-208ENST00000587260 RASSF8Q8NHQ8 419 aa16.72■□□□□ 0.27
NFIX-208ENST00000587260 AFG1LQ8WV93 481 aa16.72■□□□□ 0.27
NFIX-208ENST00000587260 CALML4Q96GE6 196 aa16.72■□□□□ 0.27
NFIX-208ENST00000587260 GPR20Q99678 358 aa16.72■□□□□ 0.27
NFIX-208ENST00000587260 TNMDQ9H2S6 317 aa16.72■□□□□ 0.27
NFIX-208ENST00000587260 HMX1Q9NP08 348 aaPredicted RBP16.72■□□□□ 0.27
NFIX-208ENST00000587260 SYNRGQ9UMZ2 1314 aa16.72■□□□□ 0.27
NFIX-208ENST00000587260 KDM3AQ9Y4C1 1321 aa16.72■□□□□ 0.27
NFIX-208ENST00000587260 MYH9P35579 1960 aaKnown RBP16.72■□□□□ 0.27
NFIX-208ENST00000587260 POTEFA5A3E0 1075 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 RARBP10826 455 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 MUTP22033 750 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 RPA1P27694 616 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 SFNP31947 248 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 GRB10Q13322 594 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 EPHA7Q15375 998 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 TMEM119Q4V9L6 283 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 NAALADL2Q58DX5 795 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 RRAGBQ5VZM2 374 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 PDXDC2PQ6P474 469 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 CNNM3Q8NE01 707 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 RDM1Q8NG50 284 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 EMID1Q96A84 441 aaPredicted RBP16.71■□□□□ 0.27
NFIX-208ENST00000587260 CCDC34Q96HJ3 373 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 DYDC2Q96IM9 177 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 PNMA5Q96PV4 448 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 PLIN2Q99541 437 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 HSD17B14Q9BPX1 270 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 EIF2AK1Q9BQI3 630 aaKnown RBP16.71■□□□□ 0.27
NFIX-208ENST00000587260 POLR3CQ9BUI4 534 aaPredicted RBP16.71■□□□□ 0.27
NFIX-208ENST00000587260 NT5C3AQ9H0P0 336 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 UNC93B1Q9H1C4 597 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 DDX20Q9UHI6 824 aaKnown RBP16.71■□□□□ 0.27
NFIX-208ENST00000587260 SERTAD1Q9UHV2 236 aa16.71■□□□□ 0.27
NFIX-208ENST00000587260 ARID2Q68CP9 1835 aa16.71■□□□□ 0.26
NFIX-208ENST00000587260 GSTTP1A0A1W2PQM5 241 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 POTEB3A0JP26 581 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 BACH1O14867 736 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 DUSP11O75319 330 aaKnown RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 MED24O75448 989 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 PGK1P00558 417 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 MMP3P08254 477 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 SUPT20HL2P0C7V6 817 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 TCF7P36402 384 aaPredicted RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 MDM2Q00987 491 aaPredicted RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 CTTNQ14247 550 aaKnown RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 MTFR1Q15390 333 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 PKN2Q16513 984 aaKnown RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 CAMK4Q16566 473 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 UGCGQ16739 394 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 MIS18BP1Q6P0N0 1132 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 POTEBQ6S5H4 581 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 SH3RF1Q7Z6J0 888 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 CCDC60Q8IWA6 550 aaPredicted RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 PPTC7Q8NI37 304 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 DHX58Q96C10 678 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.7■□□□□ 0.26
NFIX-208ENST00000587260 AP5M1Q9H0R1 490 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 MAGEF1Q9HAY2 307 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 XPNPEP3Q9NQH7 507 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 RGL1Q9NZL6 768 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 STK17AQ9UEE5 414 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 PCDHA10Q9Y5I2 948 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 MYADML2A6NDP7 307 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 PSAPP07602 524 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 C6orf222P0C671 652 aaPredicted RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 ZNF286BP0CG31 522 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 SPATA31C1P0DKV0 1188 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 PLCG1P19174 1290 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 STAT6P42226 847 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 ZNF445P59923 1031 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 BEX3Q00994 111 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 UTP14CQ5TAP6 766 aaKnown RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 POTEGQ6S5H5 508 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 ABHD15Q6UXT9 468 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 CATSPER3Q86XQ3 398 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 TRIM50Q86XT4 487 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 CEP57L1Q8IYX8 460 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 NEK9Q8TD19 979 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 SEPT1Q8WYJ6 367 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 LXNQ9BS40 222 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 GZF1Q9H116 711 aaPredicted RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 TUFT1Q9NNX1 390 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 PRDM10Q9NQV6 1147 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 GABBR1Q9UBS5 961 aa16.7■□□□□ 0.26
NFIX-208ENST00000587260 HOOK1Q9UJC3 728 aaKnown RBP16.7■□□□□ 0.26
NFIX-208ENST00000587260 BRCA2P51587 3418 aa16.69■□□□□ 0.26
NFIX-208ENST00000587260 CCL5P13501 91 aa16.69■□□□□ 0.26
NFIX-208ENST00000587260 ECM1Q16610 540 aa16.69■□□□□ 0.26
NFIX-208ENST00000587260 SWSAP1Q6NVH7 229 aa16.69■□□□□ 0.26
NFIX-208ENST00000587260 TRMT1LQ7Z2T5 733 aaKnown RBP16.69■□□□□ 0.26
NFIX-208ENST00000587260 TPH2Q8IWU9 490 aa16.69■□□□□ 0.26
NFIX-208ENST00000587260 LRRC15Q8TF66 581 aa16.69■□□□□ 0.26
NFIX-208ENST00000587260 PAGE5Q96GU1 130 aa16.69■□□□□ 0.26
NFIX-208ENST00000587260 CDK5RAP3Q96JB5 506 aa16.69■□□□□ 0.26
NFIX-208ENST00000587260 KBTBD4Q9NVX7 518 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms