RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SMAP1Q8IYB5 467 aaPredicted RBP16.78■□□□□ 0.28
ATG4D-207ENST00000587256 HERVK_113Q902F9 699 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 TBC1D32Q96NH3 1257 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 LLPHQ9BRT6 129 aaKnown RBP16.78■□□□□ 0.28
ATG4D-207ENST00000587256 TUBE1Q9UJT0 475 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 SAMM50Q9Y512 469 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 SCN5AQ14524 2016 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 CHMP2AO43633 222 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 GAS7O60861 476 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 PARNO95453 639 aaKnown RBP16.77■□□□□ 0.28
ATG4D-207ENST00000587256 MMP1P03956 469 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 CTSHP09668 335 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 SLC26A2P50443 739 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 SMAD3P84022 425 aaKnown RBP16.77■□□□□ 0.28
ATG4D-207ENST00000587256 NR5A1Q13285 461 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 Q4G0T1 1027 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 ZNF618Q5T7W0 954 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 KRT40Q6A162 431 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 GPR153Q6NV75 609 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 ABHD15Q6UXT9 468 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 PLPPR4Q7Z2D5 763 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 CCDC60Q8IWA6 550 aaPredicted RBP16.77■□□□□ 0.28
ATG4D-207ENST00000587256 TNPO1Q92973 898 aaKnown RBP16.77■□□□□ 0.28
ATG4D-207ENST00000587256 RIT2Q99578 217 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 TEKT3Q9BXF9 490 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 ZNF302Q9NR11 478 aa16.77■□□□□ 0.28
ATG4D-207ENST00000587256 CXXC1Q9P0U4 656 aaPredicted RBP16.77■□□□□ 0.28
ATG4D-207ENST00000587256 DDX25Q9UHL0 483 aaKnown RBP16.77■□□□□ 0.28
ATG4D-207ENST00000587256 WDR64B1ANS9 1081 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 EDIL3O43854 480 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 CAND2O75155 1236 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 ATG7O95352 703 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 PSAPP07602 524 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 HMGN5P82970 282 aaKnown RBP16.76■□□□□ 0.27
ATG4D-207ENST00000587256 PLCB4Q15147 1175 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 RASIP1Q5U651 963 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 PDXDC2PQ6P474 469 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 CKAP2LQ8IYA6 745 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 DIS3L2Q8IYB7 885 aaKnown RBP16.76■□□□□ 0.27
ATG4D-207ENST00000587256 FAM184AQ8NB25 1140 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 SLC5A5Q92911 643 aa16.76■□□□□ 0.27
ATG4D-207ENST00000587256 NAP1L4Q99733 375 aaKnown RBP16.76■□□□□ 0.27
ATG4D-207ENST00000587256 TRIP12Q14669 1992 aaPredicted RBP16.76■□□□□ 0.27
ATG4D-207ENST00000587256 CYP3A7-CYP3A51PA0A087WV96 503 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 IGKV6D-21A0A0A0MT36 114 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-207ENST00000587256 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-207ENST00000587256 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 FAM205CA6NFA0 338 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 RRN3P2A6NIE6 340 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 RSPH10B2B2RC85 870 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 CCNT1O60563 726 aaKnown RBP16.75■□□□□ 0.27
ATG4D-207ENST00000587256 RSPH10BP0C881 870 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 INSRRP14616 1297 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 GCFC2P16383 781 aaKnown RBP16.75■□□□□ 0.27
ATG4D-207ENST00000587256 CYP3A7P24462 503 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 GUCY1B3Q02153 619 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 SAFBQ15424 915 aaKnown RBP eCLIP16.75■□□□□ 0.27
ATG4D-207ENST00000587256 FAM109BQ6ICB4 259 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-207ENST00000587256 SWSAP1Q6NVH7 229 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 TAF2Q6P1X5 1199 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 IL27Q8NEV9 243 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 GJA10Q969M2 543 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 VWCEQ96DN2 955 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 C8orf76Q96K31 380 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 MBOAT7Q96N66 472 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 PCDHA10Q9Y5I2 948 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 SLC4A7Q9Y6M7 1214 aa16.75■□□□□ 0.27
ATG4D-207ENST00000587256 SLC37A4O43826 429 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 JAK3P52333 1124 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 ADAM17P78536 824 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 EARS2Q5JPH6 523 aaKnown RBP16.74■□□□□ 0.27
ATG4D-207ENST00000587256 ZNF697Q5TEC3 545 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 TRAF7Q6Q0C0 670 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 RUFY4Q6ZNE9 571 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 Q7L0L9 218 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 RSPH3Q86UC2 560 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 DEFB123Q8N688 67 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 ATP8B4Q8TF62 1192 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 TRAPPC12Q8WVT3 735 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 DISC1Q9NRI5 854 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 GABBR1Q9UBS5 961 aa16.74■□□□□ 0.27
ATG4D-207ENST00000587256 IGSF9BQ9UPX0 1349 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 MBLAC1A4D2B0 266 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-207ENST00000587256 BTBD18B2RXH4 712 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 MARCH6O60337 910 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 NBNO60934 754 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 PSMD10O75832 226 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 SFNP31947 248 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 MBTPS1Q14703 1052 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 PPP4R3AQ6IN85 833 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 CNKSR3Q6P9H4 555 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 MIER3Q7Z3K6 550 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 ETNPPLQ8TBG4 499 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 TNFRSF25Q93038 417 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 FAM49AQ9H0Q0 323 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-207ENST00000587256 UNC45AQ9H3U1 944 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 SZT2Q5T011 3432 aa16.73■□□□□ 0.27
ATG4D-207ENST00000587256 KAT6AQ92794 2004 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms