RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 NEK9Q8TD19 979 aa12.12□□□□□ -0.47
MBD3-203ENST00000585903 IL17RAQ96F46 866 aa12.12□□□□□ -0.47
MBD3-203ENST00000585903 C17orf80Q9BSJ5 609 aa12.12□□□□□ -0.47
MBD3-203ENST00000585903 MYL10Q9BUA6 226 aa12.12□□□□□ -0.47
MBD3-203ENST00000585903 PLVAPQ9BX97 442 aa12.12□□□□□ -0.47
MBD3-203ENST00000585903 FTHL17Q9BXU8 183 aa12.12□□□□□ -0.47
MBD3-203ENST00000585903 RC3H2Q9HBD1 1191 aaKnown RBP12.12□□□□□ -0.47
MBD3-203ENST00000585903 TUBE1Q9UJT0 475 aa12.12□□□□□ -0.47
MBD3-203ENST00000585903 FAM50BQ9Y247 325 aa12.12□□□□□ -0.47
MBD3-203ENST00000585903 WDFY4Q6ZS81 3184 aa12.12□□□□□ -0.47
MBD3-203ENST00000585903 ATP9AO75110 1047 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 CTSHP09668 335 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 AP3B2Q13367 1082 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 GRIK4Q16099 956 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 NAALADL2Q58DX5 795 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 UTP14CQ5TAP6 766 aaKnown RBP12.11□□□□□ -0.47
MBD3-203ENST00000585903 IER5Q5VY09 327 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 MCTP2Q6DN12 878 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 APOA5Q6Q788 366 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 NIPA1Q7RTP0 329 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 NME8Q8N427 588 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 PIBF1Q8WXW3 757 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 PABPC5Q96DU9 382 aaKnown RBP12.11□□□□□ -0.47
MBD3-203ENST00000585903 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
MBD3-203ENST00000585903 C11orf84Q9BUA3 381 aaPredicted RBP12.11□□□□□ -0.47
MBD3-203ENST00000585903 UPF2Q9HAU5 1272 aaKnown RBP12.11□□□□□ -0.47
MBD3-203ENST00000585903 JPH1Q9HDC5 661 aaPredicted RBP12.11□□□□□ -0.47
MBD3-203ENST00000585903 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 RNF216Q9NWF9 866 aaPredicted RBP12.11□□□□□ -0.47
MBD3-203ENST00000585903 SLC9A2Q9UBY0 812 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 MTUS1Q9ULD2 1270 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 PCDHA6Q9UN73 950 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 PCDHA8Q9Y5H6 950 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
MBD3-203ENST00000585903 ATG7O95352 703 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 HMGB1P09429 215 aaKnown RBP12.1□□□□□ -0.47
MBD3-203ENST00000585903 MRE11P49959 708 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 KRT32Q14532 448 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 LPIN1Q14693 890 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 FBXO47Q5MNV8 452 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 MARCH8Q5T0T0 291 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 FAM117BQ6P1L5 589 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 FAM178BQ8IXR5 827 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 FIBCD1Q8N539 461 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 BANK1Q8NDB2 785 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 GLG1Q92896 1179 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 ZNF689Q96CS4 500 aaPredicted RBP12.1□□□□□ -0.47
MBD3-203ENST00000585903 MXRA8Q9BRK3 442 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 NSUN3Q9H649 340 aaKnown RBP12.1□□□□□ -0.47
MBD3-203ENST00000585903 AZI2Q9H6S1 392 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 KCNH7Q9NS40 1196 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 PRKAG3Q9UGI9 489 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 ADGRA3Q8IWK6 1321 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 CNTNAP5Q8WYK1 1306 aa12.1□□□□□ -0.47
MBD3-203ENST00000585903 ATG2AQ2TAZ0 1938 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 IGKV6D-21A0A0A0MT36 114 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 GRXCR2A6NFK2 248 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 PRR33A8MZF0 331 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 LINC00271P0C7V0 271 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 BMPR1AP36894 532 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 MRPS6P82932 125 aaKnown RBP12.09□□□□□ -0.47
MBD3-203ENST00000585903 EXOSC10Q01780 885 aaKnown RBP12.09□□□□□ -0.47
MBD3-203ENST00000585903 FUT2Q10981 343 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 GPM6BQ13491 265 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 CEP55Q53EZ4 464 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 RUFY4Q6ZNE9 571 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 DHX32Q7L7V1 743 aaKnown RBP12.09□□□□□ -0.47
MBD3-203ENST00000585903 HEATR3Q7Z4Q2 680 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 CRIPAKQ8N1N5 446 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 P2RX5Q93086 422 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 BARHL2Q9NY43 387 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 PCDHA2Q9Y5H9 948 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 LOXHD1Q8IVV2 1947 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 MYO7AQ13402 2215 aa12.09□□□□□ -0.47
MBD3-203ENST00000585903 COL1A2P08123 1366 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 CCDC196A0A1B0GTZ2 297 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 SMIM35A0A1B0GVV1 85 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 ESYT2A0FGR8 921 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 M0QZ92 97 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 MEIS1O00470 390 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 ENPP3O14638 875 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 DGKIO75912 1065 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 GHRP10912 638 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 KCNA5P22460 613 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 SREBF1P36956 1147 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 CLK2P49760 499 aaKnown RBP12.08□□□□□ -0.48
MBD3-203ENST00000585903 SP4Q02446 784 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 CTC1Q2NKJ3 1217 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 ODR4Q5SWX8 454 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 MICU3Q86XE3 530 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 CMTR2Q8IYT2 770 aaKnown RBP12.08□□□□□ -0.48
MBD3-203ENST00000585903 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 FBXL16Q8N461 479 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.08□□□□□ -0.48
MBD3-203ENST00000585903 NEK1Q96PY6 1258 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 OSBPL7Q9BZF2 842 aa12.08□□□□□ -0.48
MBD3-203ENST00000585903 CD320Q9NPF0 282 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms