RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 LRRC15Q8TF66 581 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 SCLT1Q96NL6 688 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 CAMKK2Q96RR4 588 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 RUSC1Q9BVN2 902 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 IRX3P78415 501 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 GFPT1Q06210 699 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 MKRN3Q13064 507 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 TAF3Q5VWG9 929 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 IQCEQ6IPM2 695 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 PURBQ96QR8 312 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 GGA3Q9NZ52 723 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 IGKV6D-41A0A0C4DH26 115 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 GNA14O95837 355 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 TRIM49P0CI25 452 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 TRIM49CP0CI26 452 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 GRIPAP1Q4V328 841 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 ACBD3Q9H3P7 528 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 CSADQ9Y600 493 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 M0R2N6 131 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 PEX3P56589 373 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 KNOP1Q1ED39 458 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 AGBL3Q8NEM8 1001 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 TAAR1Q96RJ0 339 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 CAPN11Q9UMQ6 739 aa13.67□□□□□ -0.22
SMARCA4-208ENST00000585799 EGFRP00533 1210 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 NR3C1P04150 777 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 VIL1P09327 827 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 PADI6Q6TGC4 694 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 IRF2BP1Q8IU81 584 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 MKL1Q969V6 931 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 DUSP10Q9Y6W6 482 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 EFCAB8A8MWE9 144 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 ABL1P00519 1130 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 AFPP02771 609 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 DLATP10515 647 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 RPA1P27694 616 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 TATDN1Q6P1N9 297 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 CEP170P1Q96L14 293 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 NOX5Q96PH1 765 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 FGFBP2Q9BYJ0 223 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 GBP3Q9H0R5 595 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 GCNT4Q9P109 453 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 ZHX1Q9UKY1 873 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 GFPT2O94808 682 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 FTCDO95954 541 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 SREBF1P36956 1147 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 CLCN6P51797 869 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 SMTNP53814 917 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 CKAP4Q07065 602 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 BIRC3Q13489 604 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 RETREG2Q8NC44 543 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 GMCL1P1Q8NEA9 526 aa13.66□□□□□ -0.22
SMARCA4-208ENST00000585799 CACNA1SQ13698 1873 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 DDX60Q8IY21 1712 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 TMEM150BA6NC51 233 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 RPS6P62753 249 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 DNAAF5Q86Y56 855 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 IFT81Q8WYA0 676 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 IKZF4Q9H2S9 585 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 SEPT9Q9UHD8 586 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 PNMA6AP0CW24 399 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 NF2P35240 595 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 SRGAP1Q7Z6B7 1085 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 SIAH1Q8IUQ4 282 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 PCDHA13Q9Y5I0 950 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 A0A1W2PQC6 194 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 EIF3JO75822 258 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 TNFAIP3P21580 790 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 NPEPPSP55786 919 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 EHHADHQ08426 723 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 LLGL1Q15334 1064 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 MTERF2Q49AM1 385 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 KIAA1755Q5JYT7 1200 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 CENPPQ6IPU0 288 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 DCPSQ96C86 337 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 PARD6BQ9BYG5 372 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 SUGCTQ9HAC7 445 aa13.65□□□□□ -0.22
SMARCA4-208ENST00000585799 SLC16A4O15374 487 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 EYA4O95677 639 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 SLC9A1P19634 815 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 CASP4P49662 377 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 USP14P54578 494 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 KCNA1Q09470 495 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 PLA2G4FQ68DD2 849 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 SLC16A10Q8TF71 515 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 ZNF668Q96K58 619 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 BCAS3Q9H6U6 928 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 KCNH7Q9NS40 1196 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 STK24Q9Y6E0 443 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 NCK2O43639 380 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 KRT5P13647 590 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 ODF2Q5BJF6 829 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 TRIM65Q6PJ69 517 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 TSGA10Q9BZW7 698 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 OGFRQ9NZT2 677 aa13.64□□□□□ -0.23
SMARCA4-208ENST00000585799 GINS2Q9Y248 185 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms