RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 VAT1LQ9HCJ6 419 aa10.69□□□□□ -0.7
SDF2-203ENST00000585749 GTF2IRD1Q9UHL9 959 aa10.69□□□□□ -0.7
SDF2-203ENST00000585749 BAZ2BQ9UIF8 2168 aaKnown RBP10.69□□□□□ -0.7
SDF2-203ENST00000585749 DNAH14Q0VDD8 3507 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 STXBP3O00186 592 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 NCK2O43639 380 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 PPP1R11O60927 126 aaPredicted RBP10.68□□□□□ -0.7
SDF2-203ENST00000585749 TBX10O75333 385 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 LGR5O75473 907 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 AMHP03971 560 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 HMGB1P09429 215 aaKnown RBP10.68□□□□□ -0.7
SDF2-203ENST00000585749 CALM1P0DP23 149 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 CALM2P0DP24 149 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 CALM3P0DP25 149 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 TXNP10599 105 aaKnown RBP10.68□□□□□ -0.7
SDF2-203ENST00000585749 SMARCA1P28370 1054 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 HSPA4P34932 840 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 PDE4DQ08499 809 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 PTK7Q13308 1070 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 SMAD4Q13485 552 aaKnown RBP10.68□□□□□ -0.7
SDF2-203ENST00000585749 ZNF618Q5T7W0 954 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 NFXL1Q6ZNB6 911 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 HOMER1Q86YM7 354 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 TMEM192Q8IY95 271 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 FBXL6Q8N531 539 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 SAMD3Q8N6K7 520 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 AFG1LQ8WV93 481 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 KCNB2Q92953 911 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 PIGSQ96S52 555 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 MYL10Q9BUA6 226 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 MAP3K20Q9NYL2 800 aaKnown RBP10.68□□□□□ -0.7
SDF2-203ENST00000585749 HDAC6Q9UBN7 1215 aa10.68□□□□□ -0.7
SDF2-203ENST00000585749 PTPRZ1P23471 2315 aaPredicted RBP10.68□□□□□ -0.7
SDF2-203ENST00000585749 PNMA6FA0A0J9YX94 578 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 B4DLN1 442 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 ARHGAP33O14559 1287 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 OPLAHO14841 1288 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 GNAQP50148 359 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 HSD17B4P51659 736 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 MRPL12P52815 198 aaKnown RBP10.67□□□□□ -0.7
SDF2-203ENST00000585749 VCPP55072 806 aaKnown RBP10.67□□□□□ -0.7
SDF2-203ENST00000585749 ZXDAP98168 799 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 EXOSC10Q01780 885 aaKnown RBP10.67□□□□□ -0.7
SDF2-203ENST00000585749 HYAL1Q12794 435 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 ADCK5Q3MIX3 580 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 CCDC62Q6P9F0 684 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 DHX32Q7L7V1 743 aaKnown RBP10.67□□□□□ -0.7
SDF2-203ENST00000585749 DBF4BQ8NFT6 615 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 SYTL5Q8TDW5 730 aaPredicted RBP10.67□□□□□ -0.7
SDF2-203ENST00000585749 LZTS2Q9BRK4 669 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 LRRC2Q9BYS8 371 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 PCDHA1Q9Y5I3 950 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 SLC12A7Q9Y666 1083 aa10.67□□□□□ -0.7
SDF2-203ENST00000585749 KIAA1217Q5T5P2 1943 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 EMSYQ7Z589 1322 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 GTF2F1P35269 517 aaKnown RBP eCLIP10.66□□□□□ -0.7
SDF2-203ENST00000585749 PSEN2P49810 448 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 LSM11P83369 360 aaKnown RBP eCLIP10.66□□□□□ -0.7
SDF2-203ENST00000585749 ARHGAP1Q07960 439 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 APOA5Q6Q788 366 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 C7orf31Q8N865 590 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 NSUN6Q8TEA1 469 aaKnown RBP10.66□□□□□ -0.7
SDF2-203ENST00000585749 TBC1D5Q92609 795 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 ATOH1Q92858 354 aaPredicted RBP10.66□□□□□ -0.7
SDF2-203ENST00000585749 TOP1MTQ969P6 601 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 IWS1Q96ST2 819 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 YME1L1Q96TA2 773 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 COL20A1Q9P218 1284 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 SNX14Q9Y5W7 946 aa10.66□□□□□ -0.7
SDF2-203ENST00000585749 RIF1Q5UIP0 2472 aaKnown RBP10.66□□□□□ -0.7
SDF2-203ENST00000585749 LOC730098B7Z3J9 87 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 PROB1E7EW31 1015 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 C5orf67F2Z3F1 127 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 LINC01565O15544 149 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 PLEKHA8P1O95397 391 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 CFBP00751 764 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 GH1P01241 217 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 LINC00271P0C7V0 271 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 RXRAP19793 462 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 CASTP20810 708 aaKnown RBP10.65□□□□□ -0.7
SDF2-203ENST00000585749 RCAN1P53805 252 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 ZNF200P98182 395 aaPredicted RBP10.65□□□□□ -0.7
SDF2-203ENST00000585749 SIGLEC14Q08ET2 396 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 HIC1Q14526 733 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 LY6KQ17RY6 165 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 PLEKHG4Q58EX7 1191 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 SYNE3Q6ZMZ3 975 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 TMTC3Q6ZXV5 915 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 ASCL5Q7RTU5 278 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 ERMP1Q7Z2K6 904 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 MICU3Q86XE3 530 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 FANCBQ8NB91 859 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 RRP36Q96EU6 259 aaKnown RBP10.65□□□□□ -0.7
SDF2-203ENST00000585749 ASIC4Q96FT7 647 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 TAAR1Q96RJ0 339 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 RMDN3Q96TC7 470 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 ALG1Q9BT22 464 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 IRF2BPLQ9H1B7 796 aa10.65□□□□□ -0.7
SDF2-203ENST00000585749 SEC63Q9UGP8 760 aaKnown RBP10.65□□□□□ -0.7
SDF2-203ENST00000585749 CD207Q9UJ71 328 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms