RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 VAV2P52735 878 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 TJP1Q07157 1748 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 BIRC3Q13489 604 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 PDIA5Q14554 519 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 SLC15A2Q16348 729 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 ZNF746Q6NUN9 644 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-217ENST00000584582 TAX1BP1Q86VP1 789 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 ZNF713Q8N859 430 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-217ENST00000584582 AP1M1Q9BXS5 423 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 GINS2Q9Y248 185 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 CIAPIN1Q6FI81 312 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 GBP6Q6ZN66 633 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 SH3BP5LQ7L8J4 393 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 UHMK1Q8TAS1 419 aaKnown RBP12.38□□□□□ -0.43
TOP3A-217ENST00000584582 KRT12Q99456 494 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 PARVGQ9HBI0 331 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 ZNF446Q9NWS9 450 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 NYAP2Q9P242 653 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 CAPN6Q9Y6Q1 641 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 TLDC2A0PJX2 215 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 FANCGO15287 622 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 N4BP1O75113 896 aaKnown RBP12.38□□□□□ -0.43
TOP3A-217ENST00000584582 PALMO75781 387 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 AFPP02771 609 aaKnown RBP12.38□□□□□ -0.43
TOP3A-217ENST00000584582 NR3C1P04150 777 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 ARP10275 920 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 PEX3P56589 373 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 GUCY2DQ02846 1103 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 PEX26Q7Z412 305 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 TSGA10Q9BZW7 698 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 PHLPP1O60346 1717 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 EML1O00423 815 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 STAT1P42224 750 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.433e-9■■■■■ 34.7
TOP3A-217ENST00000584582 HERVK_113P62684 666 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 RPS6KA1Q15418 735 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 ELOA2Q8IYF1 753 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-217ENST00000584582 COG1Q8WTW3 980 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 LXNQ9BS40 222 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 USP20Q9Y2K6 914 aa12.38□□□□□ -0.43
TOP3A-217ENST00000584582 SSTR3P32745 418 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-217ENST00000584582 HPDP32754 393 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-217ENST00000584582 GCLMP48507 274 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 JAG1P78504 1218 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 KNOP1Q1ED39 458 aaKnown RBP12.37□□□□□ -0.43
TOP3A-217ENST00000584582 MTMR9Q96QG7 549 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 CTTNBP2NLQ9P2B4 639 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 ARHGAP20Q9P2F6 1191 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 SUGT1Q9Y2Z0 365 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 ESYT2A0FGR8 921 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 GOLGA6L10A6NI86 522 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 ZBED4O75132 1171 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 HMGB2P26583 209 aaKnown RBP12.37□□□□□ -0.43
TOP3A-217ENST00000584582 NPEPPSP55786 919 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 GABPAQ06546 454 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 TRAF1Q13077 416 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 MTMR2Q13614 643 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 COG2Q14746 738 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 APTXQ7Z2E3 356 aaKnown RBP12.37□□□□□ -0.43
TOP3A-217ENST00000584582 NLRX1Q86UT6 975 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 RETREG2Q8NC44 543 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 SCLT1Q96NL6 688 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 KIFC3Q9BVG8 833 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 PACSIN1Q9BY11 444 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 DPH5Q9H2P9 285 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 ZHX2Q9Y6X8 837 aa12.37□□□□□ -0.43
TOP3A-217ENST00000584582 NFIBO00712 420 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 SLC16A4O15374 487 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 CASP8Q14790 479 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 RMDN3Q96TC7 470 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 TUBGCP6Q96RT7 1819 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 A0A1W2PQC6 194 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 MYCNP04198 464 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-217ENST00000584582 ASNSP08243 561 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 KCNJ6P48051 423 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 ATP1A2P50993 1020 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 USP11P51784 963 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 IFFO1Q0D2I5 559 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 AP3B2Q13367 1082 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 CEP55Q53EZ4 464 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 CENPPQ6IPU0 288 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 ALKBH5Q6P6C2 394 aaKnown RBP12.36□□□□□ -0.43
TOP3A-217ENST00000584582 RSBN1LQ6PCB5 846 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-217ENST00000584582 ARHGAP27Q6ZUM4 889 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 SCFD1Q8WVM8 642 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 ZKSCAN4Q969J2 545 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-217ENST00000584582 SAAL1Q96ER3 474 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 WRNIP1Q96S55 665 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 PPP1R16BQ96T49 567 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 GPRC5CQ9NQ84 441 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 LARSQ9P2J5 1176 aaKnown RBP12.36□□□□□ -0.43
TOP3A-217ENST00000584582 FHOD1Q9Y613 1164 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 COL4A1P02462 1669 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 GRIPAP1Q4V328 841 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 PLA2G4FQ68DD2 849 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 LMBRD2Q68DH5 695 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-217ENST00000584582 PPP4R3AQ6IN85 833 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms