RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 CPLX4Q7Z7G2 160 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 CEP95Q96GE4 821 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 IRAK4Q9NWZ3 460 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 C15orf41Q9Y2V0 281 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 ZNF662Q6ZS27 426 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 SH3RF1Q7Z6J0 888 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 OR2W6PQ8NHA6 318 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 PURBQ96QR8 312 aaKnown RBP13.95□□□□□ -0.18
ITGB4-212ENST00000584558 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 SH3BP1Q9Y3L3 701 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 KIF13BQ9NQT8 1826 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 MYO3BQ8WXR4 1341 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 M0R2N6 131 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 TRAPPC3O43617 180 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 TCP1P17987 556 aaKnown RBP13.95□□□□□ -0.18
ITGB4-212ENST00000584558 TNFRSF8P28908 595 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 KLK7P49862 253 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 GKAP1Q5VSY0 366 aaPredicted RBP13.95□□□□□ -0.18
ITGB4-212ENST00000584558 TYW1BQ6NUM6 668 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 EEF2KMTQ96G04 330 aa13.95□□□□□ -0.18
ITGB4-212ENST00000584558 PHF20L1A8MW92 1017 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 GCOM1H8Y6P7 765 aaPredicted RBP13.94□□□□□ -0.18
ITGB4-212ENST00000584558 USO1O60763 962 aaKnown RBP13.94□□□□□ -0.18
ITGB4-212ENST00000584558 MYZAPP0CAP1 466 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 TRADDQ15628 312 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 CCDC47Q96A33 483 aaKnown RBP13.94□□□□□ -0.18
ITGB4-212ENST00000584558 CCDC42Q96M95 316 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 EBF2Q9HAK2 575 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 GDAQ9Y2T3 454 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 LGALS16A8MUM7 142 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 G3V3G9 751 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 DNAJC8O75937 253 aaPredicted RBP13.94□□□□□ -0.18
ITGB4-212ENST00000584558 PLEKP08567 350 aaPredicted RBP13.94□□□□□ -0.18
ITGB4-212ENST00000584558 BYSLQ13895 437 aaKnown RBP13.94□□□□□ -0.18
ITGB4-212ENST00000584558 DCAF8Q5TAQ9 597 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 ZNF572Q7Z3I7 529 aaPredicted RBP13.94□□□□□ -0.18
ITGB4-212ENST00000584558 CD302Q8IX05 232 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 LZTS2Q9BRK4 669 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 SPZ1Q9BXG8 430 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 IFIH1Q9BYX4 1025 aaKnown RBP13.94□□□□□ -0.18
ITGB4-212ENST00000584558 TSGA10Q9BZW7 698 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 PCDHAC2Q9Y5I4 1007 aa13.94□□□□□ -0.18
ITGB4-212ENST00000584558 BAZ2BQ9UIF8 2168 aaKnown RBP13.93□□□□□ -0.18
ITGB4-212ENST00000584558 TRIM75PA6NK02 468 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 EIF4E1BA6NMX2 242 aaKnown RBP13.93□□□□□ -0.18
ITGB4-212ENST00000584558 B4DLN1 442 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 ZNF263O14978 683 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 KCNA3P22001 575 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 SHMT1P34896 483 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 NFIAQ12857 509 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 MEA1Q16626 185 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 LACTB2Q53H82 288 aaPredicted RBP13.93□□□□□ -0.18
ITGB4-212ENST00000584558 CC2D2BQ6DHV5 1058 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 ANKRD13CQ8N6S4 541 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 ALS2CR12Q96Q35 445 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 TMBIM4Q9HC24 238 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 SRRM3A6NNA2 597 aaPredicted RBP13.93□□□□□ -0.18
ITGB4-212ENST00000584558 CAND2O75155 1236 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 AKR1B1P15121 316 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 NLRP5P59047 1200 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 HLTFQ14527 1009 aaKnown RBP eCLIP13.93□□□□□ -0.18
ITGB4-212ENST00000584558 AOC3Q16853 763 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 MIS18BP1Q6P0N0 1132 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 TBC1D1Q86TI0 1168 aaPredicted RBP13.93□□□□□ -0.18
ITGB4-212ENST00000584558 CCDC170Q8IYT3 715 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 CCDC63Q8NA47 563 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 DAGLBQ8NCG7 672 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 CCT6BQ92526 530 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 GPKOWQ92917 476 aaPredicted RBP eCLIP13.93□□□□□ -0.18
ITGB4-212ENST00000584558 GDF3Q9NR23 364 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 MTMR4Q9NYA4 1195 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 SWAP70Q9UH65 585 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 STXBP3O00186 592 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 SMARCA1P28370 1054 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 ZFPM1Q8IX07 1006 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 CASKIN2Q8WXE0 1202 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 RAPGEF5Q92565 580 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 SH2D4AQ9H788 454 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 SERPINB13Q9UIV8 391 aa13.93□□□□□ -0.18
ITGB4-212ENST00000584558 KLRF2D3W0D1 207 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 DIAPH2O60879 1101 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 SMNDC1O75940 238 aaKnown RBP eCLIP13.92□□□□□ -0.18
ITGB4-212ENST00000584558 GOLGA8HP0CJ92 632 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 PECAM1P16284 738 aaPredicted RBP13.92□□□□□ -0.18
ITGB4-212ENST00000584558 PRCPP42785 496 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 TRAPPC10P48553 1259 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 RNASE9P60153 205 aaKnown RBP13.92□□□□□ -0.18
ITGB4-212ENST00000584558 IRF2BP1Q8IU81 584 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 KIAA0825Q8IV33 1275 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 ZNF570Q96NI8 536 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 KRT12Q99456 494 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 IDI2Q9BXS1 227 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 SLC12A6Q9UHW9 1150 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 PCDHA4Q9UN74 947 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 YDJCA8MPS7 323 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 SNHG28P0DPA3 235 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 CALML3P27482 149 aa13.92□□□□□ -0.18
ITGB4-212ENST00000584558 CDC37Q16543 378 aaPredicted RBP13.92□□□□□ -0.18
ITGB4-212ENST00000584558 TTC38Q5R3I4 469 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms