RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 MCM4P33991 863 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 QARSP47897 775 aaKnown RBP20.53■□□□□ 0.88
RFFL-211ENST00000584541 CYP4A11Q02928 519 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 MTFR1Q15390 333 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 ZRSR1Q15695 479 aaKnown RBP20.53■□□□□ 0.88
RFFL-211ENST00000584541 UTP14CQ5TAP6 766 aaKnown RBP20.53■□□□□ 0.88
RFFL-211ENST00000584541 SWSAP1Q6NVH7 229 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 FSIP1Q8NA03 581 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 DYDC2Q96IM9 177 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 PYM1Q9BRP8 204 aaKnown RBP20.53■□□□□ 0.88
RFFL-211ENST00000584541 NT5C3AQ9H0P0 336 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 ZNF302Q9NR11 478 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 GABBR1Q9UBS5 961 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 EMSYQ7Z589 1322 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 PGK1P00558 417 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 MUTP22033 750 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 PSMC5P62195 406 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 NKX3-2P78367 333 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 GNASQ5JWF2 1037 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 CCDC73Q6ZRK6 1079 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 USP49Q70CQ1 688 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 RNF180Q86T96 592 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 TPH2Q8IWU9 490 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 BANK1Q8NDB2 785 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 GLG1Q92896 1179 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 HSD17B14Q9BPX1 270 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 LXNQ9BS40 222 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 MCOLN1Q9GZU1 580 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 SMARCAD1Q9H4L7 1026 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 ZSWIM4Q9H7M6 989 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 PAK6Q9NQU5 681 aaPredicted RBP20.52■□□□□ 0.88
RFFL-211ENST00000584541 LMBRD1Q9NUN5 540 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 RGL1Q9NZL6 768 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 TELO2Q9Y4R8 837 aa20.52■□□□□ 0.88
RFFL-211ENST00000584541 IGKV6D-21A0A0A0MT36 114 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 A0A1B0GVL5 298 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 ADAMTS4O75173 837 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 GADD45BO75293 160 aaPredicted RBP20.51■□□□□ 0.87
RFFL-211ENST00000584541 MED24O75448 989 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 LGR5O75473 907 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 SLITRK3O94933 977 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 MYCNP04198 464 aaPredicted RBP20.51■□□□□ 0.87
RFFL-211ENST00000584541 HOXD8P13378 290 aaPredicted RBP20.51■□□□□ 0.87
RFFL-211ENST00000584541 STAT5BP51692 787 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 BEX3Q00994 111 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 CTTNQ14247 550 aaKnown RBP20.51■□□□□ 0.87
RFFL-211ENST00000584541 LHX8Q68G74 356 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 PDXDC2PQ6P474 469 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 CATSPER3Q86XQ3 398 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 CCDC60Q8IWA6 550 aaPredicted RBP20.51■□□□□ 0.87
RFFL-211ENST00000584541 KCTD17Q8N5Z5 321 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 PCSK9Q8NBP7 692 aaKnown RBP20.51■□□□□ 0.87
RFFL-211ENST00000584541 ARRDC4Q8NCT1 418 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 AFAP1L1Q8TED9 768 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 MMTAG2Q9BU76 263 aaKnown RBP20.51■□□□□ 0.87
RFFL-211ENST00000584541 ZNF215Q9UL58 517 aaPredicted RBP20.51■□□□□ 0.87
RFFL-211ENST00000584541 KCNH3Q9ULD8 1083 aa20.51■□□□□ 0.87
RFFL-211ENST00000584541 POTEB3A0JP26 581 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 POTEFA5A3E0 1075 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 LGALS2P05162 132 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 MYL3P08590 195 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 SPATA31C1P0DKV0 1188 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 PFKFB1P16118 471 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 CST5P28325 142 aaPredicted RBP20.5■□□□□ 0.87
RFFL-211ENST00000584541 SLC26A2P50443 739 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 KARSQ15046 597 aaKnown RBP20.5■□□□□ 0.87
RFFL-211ENST00000584541 HYIQ5T013 277 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 RRAGBQ5VZM2 374 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 POTEBQ6S5H4 581 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 PLPPR4Q7Z2D5 763 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 CKAP2LQ8IYA6 745 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 DEFB118Q96PH6 123 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 KIAA1024Q9UPX6 916 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 MAFBQ9Y5Q3 323 aaPredicted RBP20.5■□□□□ 0.87
RFFL-211ENST00000584541 IGSF9BQ9UPX0 1349 aa20.5■□□□□ 0.87
RFFL-211ENST00000584541 SYKP43405 635 aa20.49■□□□□ 0.87
RFFL-211ENST00000584541 C4orf19Q8IY42 314 aa20.49■□□□□ 0.87
RFFL-211ENST00000584541 PDILTQ8N807 584 aa20.49■□□□□ 0.87
RFFL-211ENST00000584541 KLHDC9Q8NEP7 349 aa20.49■□□□□ 0.87
RFFL-211ENST00000584541 DDX19AQ9NUU7 478 aaKnown RBP20.49■□□□□ 0.87
RFFL-211ENST00000584541 ERAP1Q9NZ08 941 aa20.49■□□□□ 0.87
RFFL-211ENST00000584541 FAM237AA0A1B0GTK4 181 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 MYADML2A6NDP7 307 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 CTAGE5O15320 804 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 LYPLA2O95372 231 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 ZNF286BP0CG31 522 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 PLCG1P19174 1290 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 STAT6P42226 847 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 GRB10Q13322 594 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 LRRC41Q15345 812 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 UGCGQ16739 394 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 POTEGQ6S5H5 508 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 IQUBQ8NA54 791 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 FAM167AQ96KS9 214 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 CCDC43Q96MW1 224 aaKnown RBP20.48■□□□□ 0.87
RFFL-211ENST00000584541 PNMA5Q96PV4 448 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 NACC1Q96RE7 527 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 PCYT2Q99447 389 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 PLIN2Q99541 437 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 KATNAL1Q9BW62 490 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms