RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 WNT7AO00755 349 aa28.16■■■□□ 2.1
TTC39C-209ENST00000584250 STAT5BP51692 787 aa28.16■■■□□ 2.1
TTC39C-209ENST00000584250 RBL2Q08999 1139 aa28.16■■■□□ 2.1
TTC39C-209ENST00000584250 ZNF618Q5T7W0 954 aa28.16■■■□□ 2.1
TTC39C-209ENST00000584250 FAM109BQ6ICB4 259 aaPredicted RBP28.16■■■□□ 2.1
TTC39C-209ENST00000584250 NEK8Q86SG6 692 aa28.16■■■□□ 2.1
TTC39C-209ENST00000584250 CAGE1Q8TC20 777 aa28.16■■■□□ 2.1
TTC39C-209ENST00000584250 TRAPPC12Q8WVT3 735 aa28.16■■■□□ 2.1
TTC39C-209ENST00000584250 CXXC1Q9P0U4 656 aaPredicted RBP28.16■■■□□ 2.1
TTC39C-209ENST00000584250 SZT2Q5T011 3432 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 ATP4AP20648 1035 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 PPFIA1Q13136 1202 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 MBTPS1Q14703 1052 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 GRIK4Q16099 956 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 MARCH8Q5T0T0 291 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 SWSAP1Q6NVH7 229 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 RUFY4Q6ZNE9 571 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 LRRC8DQ7L1W4 858 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 OTOP2Q7RTS6 562 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 ETNPPLQ8TBG4 499 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 OSBPL7Q9BZF2 842 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 AZI2Q9H6S1 392 aa28.15■■■□□ 2.1
TTC39C-209ENST00000584250 DDX25Q9UHL0 483 aaKnown RBP28.15■■■□□ 2.1
TTC39C-209ENST00000584250 LAMA2P24043 3122 aaKnown RBP28.14■■■□□ 2.1
TTC39C-209ENST00000584250 WDR81Q562E7 1941 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 BACH1O14867 736 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 PSMD10O75832 226 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 INSRRP14616 1297 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 SELPP16109 830 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 IGBP1P78318 339 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 RASIP1Q5U651 963 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 LRCH2Q5VUJ6 765 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 ZNF746Q6NUN9 644 aaPredicted RBP28.14■■■□□ 2.1
TTC39C-209ENST00000584250 MOXD1Q6UVY6 613 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 PLPPR4Q7Z2D5 763 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 AFAP1L1Q8TED9 768 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 UNC45AQ9H3U1 944 aa28.14■■■□□ 2.1
TTC39C-209ENST00000584250 NRCAMQ92823 1304 aa28.14■■■□□ 2.09
TTC39C-209ENST00000584250 CHMP2AO43633 222 aa28.13■■■□□ 2.09
TTC39C-209ENST00000584250 GAS7O60861 476 aa28.13■■■□□ 2.09
TTC39C-209ENST00000584250 FGBP02675 491 aa28.13■■■□□ 2.09
TTC39C-209ENST00000584250 TRIM29Q14134 588 aa28.13■■■□□ 2.09
TTC39C-209ENST00000584250 TCTN1Q2MV58 587 aa28.13■■■□□ 2.09
TTC39C-209ENST00000584250 MIS18BP1Q6P0N0 1132 aa28.13■■■□□ 2.09
TTC39C-209ENST00000584250 PSRC1Q6PGN9 363 aaPredicted RBP28.13■■■□□ 2.09
TTC39C-209ENST00000584250 CCDC155Q8N6L0 562 aa28.13■■■□□ 2.09
TTC39C-209ENST00000584250 C8orf76Q96K31 380 aa28.13■■■□□ 2.09
TTC39C-209ENST00000584250 RIT2Q99578 217 aa28.13■■■□□ 2.09
TTC39C-209ENST00000584250 NBNO60934 754 aa28.12■■■□□ 2.09
TTC39C-209ENST00000584250 SLC34A2O95436 690 aa28.12■■■□□ 2.09
TTC39C-209ENST00000584250 THPOP40225 353 aa28.12■■■□□ 2.09
TTC39C-209ENST00000584250 KRT76Q01546 638 aa28.12■■■□□ 2.09
TTC39C-209ENST00000584250 HERVK_113Q902F9 699 aa28.12■■■□□ 2.09
TTC39C-209ENST00000584250 BRMS1Q9HCU9 246 aa28.12■■■□□ 2.09
TTC39C-209ENST00000584250 ZNF302Q9NR11 478 aa28.12■■■□□ 2.09
TTC39C-209ENST00000584250 TRPC6Q9Y210 931 aa28.12■■■□□ 2.09
TTC39C-209ENST00000584250 GRXCR1A8MXD5 290 aa28.11■■■□□ 2.09
TTC39C-209ENST00000584250 CCNT1O60563 726 aaKnown RBP28.11■■■□□ 2.09
TTC39C-209ENST00000584250 HMGN5P82970 282 aaKnown RBP28.11■■■□□ 2.09
TTC39C-209ENST00000584250 PDXDC2PQ6P474 469 aa28.11■■■□□ 2.09
TTC39C-209ENST00000584250 B3GNT9Q6UX72 402 aa28.11■■■□□ 2.09
TTC39C-209ENST00000584250 TRMT1LQ7Z2T5 733 aaKnown RBP28.11■■■□□ 2.09
TTC39C-209ENST00000584250 TEKT3Q9BXF9 490 aa28.11■■■□□ 2.09
TTC39C-209ENST00000584250 PCDHA10Q9Y5I2 948 aa28.11■■■□□ 2.09
TTC39C-209ENST00000584250 MYH9P35579 1960 aaKnown RBP28.1■■■□□ 2.09
TTC39C-209ENST00000584250 POTEB3A0JP26 581 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 CTSHP09668 335 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 GNAT1P11488 350 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 UGCGQ16739 394 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 PPP4R3AQ6IN85 833 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 POTEBQ6S5H4 581 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 POTEDQ86YR6 584 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 SMAP1Q8IYB5 467 aaPredicted RBP28.1■■■□□ 2.09
TTC39C-209ENST00000584250 RPUSD2Q8IZ73 545 aaKnown RBP28.1■■■□□ 2.09
TTC39C-209ENST00000584250 HAS1Q92839 578 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 KCNMB3Q9NPA1 279 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 DISC1Q9NRI5 854 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 GABBR1Q9UBS5 961 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 TUBE1Q9UJT0 475 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 SAMM50Q9Y512 469 aa28.1■■■□□ 2.09
TTC39C-209ENST00000584250 MBLAC1A4D2B0 266 aaPredicted RBP28.09■■■□□ 2.09
TTC39C-209ENST00000584250 FAM160B1Q5W0V3 765 aa28.09■■■□□ 2.09
TTC39C-209ENST00000584250 Q7L0L9 218 aa28.09■■■□□ 2.09
TTC39C-209ENST00000584250 FAM184AQ8NB25 1140 aa28.09■■■□□ 2.09
TTC39C-209ENST00000584250 FBXO18Q8NFZ0 1043 aa28.09■■■□□ 2.09
TTC39C-209ENST00000584250 FTOQ9C0B1 505 aaKnown RBP eCLIP28.09■■■□□ 2.09
TTC39C-209ENST00000584250 MAFBQ9Y5Q3 323 aaPredicted RBP28.09■■■□□ 2.09
TTC39C-209ENST00000584250 KIF28PB7ZC32 967 aa28.08■■■□□ 2.09
TTC39C-209ENST00000584250 ZNF862O60290 1169 aa28.08■■■□□ 2.09
TTC39C-209ENST00000584250 PSAPP07602 524 aa28.08■■■□□ 2.09
TTC39C-209ENST00000584250 RFC2P35250 354 aa28.08■■■□□ 2.09
TTC39C-209ENST00000584250 ATP8B4Q8TF62 1192 aa28.08■■■□□ 2.09
TTC39C-209ENST00000584250 WDR64B1ANS9 1081 aa28.07■■■□□ 2.08
TTC39C-209ENST00000584250 ZBTB42B2RXF5 422 aa28.07■■■□□ 2.08
TTC39C-209ENST00000584250 EML1O00423 815 aa28.07■■■□□ 2.08
TTC39C-209ENST00000584250 GCFC2P16383 781 aaKnown RBP28.07■■■□□ 2.08
TTC39C-209ENST00000584250 TCEAL9Q9UHQ7 104 aa28.07■■■□□ 2.08
TTC39C-209ENST00000584250 VAV3Q9UKW4 847 aa28.07■■■□□ 2.08
TTC39C-209ENST00000584250 IGSF9BQ9UPX0 1349 aa28.07■■■□□ 2.08
TTC39C-209ENST00000584250 RSPH10B2B2RC85 870 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms