RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 ZSCAN10Q96SZ4 725 aaPredicted RBP9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 KATNAL1Q9BW62 490 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 TMEM134Q9H6X4 195 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 JMJD4Q9H9V9 463 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 MRPL11Q9Y3B7 192 aaKnown RBP9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 ABHD14A-ACY1A0A1B0GW23 586 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 LINC01553A4QN01 128 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 GPR37L1O60883 481 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 PPP1R11O60927 126 aaPredicted RBP9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 EIF3JO75822 258 aaKnown RBP9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 PARNO95453 639 aaKnown RBP9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 MYCLP12524 364 aaPredicted RBP9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 HSD17B4P51659 736 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 PTK7Q13308 1070 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 CCDC178Q5BJE1 867 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 B4GALNT3Q6L9W6 998 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 DHX37Q8IY37 1157 aaKnown RBP9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 CRIPAKQ8N1N5 446 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 STAG2Q8N3U4 1231 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 ANKS1AQ92625 1134 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 TGS1Q96RS0 853 aaKnown RBP9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 PDCD2LQ9BRP1 358 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 LRFN3Q9BTN0 628 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 MAF1Q9H063 256 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 SUGCTQ9HAC7 445 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 PKD2L1Q9P0L9 805 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 ZSWIM5Q9P217 1185 aa9.06□□□□□ -0.96
SMCHD1-210ENST00000583800 MYO7AQ13402 2215 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 FAM86C2PA6NEL3 165 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 LGR5O75473 907 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 WFS1O76024 890 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 GGPS1O95749 300 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 UBA1P22314 1058 aaKnown RBP9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 HOXA13P31271 388 aaPredicted RBP9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 ERVK-21P61565 698 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 LAMC2Q13753 1193 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 IKBKEQ14164 716 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 PGM5Q15124 567 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 HSDL1Q3SXM5 330 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 PLEKHM2Q8IWE5 1019 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 MYOCDQ8IZQ8 938 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 IL31RAQ8NI17 732 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 GPKOWQ92917 476 aaPredicted RBP eCLIP9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 RAD9AQ99638 391 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 C17orf80Q9BSJ5 609 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 AMNQ9BXJ7 453 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 SLC6A16Q9GZN6 736 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 IL25Q9H293 177 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 UBE2ZQ9H832 354 aaPredicted RBP9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 CD320Q9NPF0 282 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 C11orf16Q9NQ32 467 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 DIAPH3Q9NSV4 1193 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 LMCD1Q9NZU5 365 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 DACH1Q9UI36 760 aa9.05□□□□□ -0.96
SMCHD1-210ENST00000583800 LOXHD1Q8IVV2 1947 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 KIAA1671Q9BY89 1806 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 DDX11L8A8MPP1 907 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 EFCAB14O75071 495 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 CFHP08603 1231 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 HOXD8P13378 290 aaPredicted RBP9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 NDUFV2P19404 249 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 THPOP40225 353 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 NT5C2P49902 561 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 SP2Q02086 613 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 GHRHRQ02643 423 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 FOXC1Q12948 553 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 IMMTQ16891 758 aaKnown RBP9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 TMEM31Q5JXX7 168 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 CELF3Q5SZQ8 465 aaKnown RBP9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 IFIT1BQ5T764 474 aaKnown RBP9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 HOMER1Q86YM7 354 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 SMC5Q8IY18 1101 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 DBF4BQ8NFT6 615 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 SPATA33Q96N06 139 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 UBAC1Q9BSL1 405 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 C16orf70Q9BSU1 422 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 DSCC1Q9BVC3 393 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 KRT23Q9C075 422 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 MAD2L2Q9UI95 211 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 HCN4Q9Y3Q4 1203 aa9.04□□□□□ -0.96
SMCHD1-210ENST00000583800 C17orf102A2RUQ5 167 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 RSPH10B2B2RC85 870 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 KLRF2D3W0D1 207 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 ZBTB5O15062 677 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 NR1I2O75469 434 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 AMHP03971 560 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 LGALS2P05162 132 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 CTSHP09668 335 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 RSPH10BP0C881 870 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 IL9P15248 144 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 KCNA5P22460 613 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 SEC23AQ15436 765 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 SLC35G1Q2M3R5 365 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 STOX1Q6ZVD7 989 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 CYB5R4Q7L1T6 521 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 SERINC5Q86VE9 423 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 VSIG10LQ86VR7 867 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 CHD1LQ86WJ1 897 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 FCHSD1Q86WN1 690 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms