RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 FBXO47Q5MNV8 452 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 ODR4Q5SWX8 454 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 STOX1Q6ZVD7 989 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 MIER1Q8N108 512 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 TDRD5Q8NAT2 981 aaKnown RBP12.9□□□□□ -0.34
CASC3-208ENST00000583649 TMEM87AQ8NBN3 555 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 ESR2Q92731 530 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 RMDN1Q96DB5 314 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 NGRNQ9NPE2 291 aaKnown RBP12.9□□□□□ -0.34
CASC3-208ENST00000583649 TMEM260Q9NX78 707 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 TRIM6-TRIM34B2RNG4 842 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 FGF18O76093 207 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 BRD1O95696 1058 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 PARP1P09874 1014 aaKnown RBP12.89□□□□□ -0.35
CASC3-208ENST00000583649 SCG2P13521 617 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 KRT17Q04695 432 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 PAK2Q13177 524 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 ANGPT1Q15389 498 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 ALX1Q15699 326 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 QRICH1Q2TAL8 776 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 UTP14CQ5TAP6 766 aaKnown RBP12.89□□□□□ -0.35
CASC3-208ENST00000583649 S1PR5Q9H228 398 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 ENTPD7Q9NQZ7 604 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 TUBE1Q9UJT0 475 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 LZTS1Q9Y250 596 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 PCDHA1Q9Y5I3 950 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
CASC3-208ENST00000583649 MYO15AQ9UKN7 3530 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 GCOM1H8Y6P7 765 aaPredicted RBP12.88□□□□□ -0.35
CASC3-208ENST00000583649 FIBPO43427 364 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 POLR2MP0CAP2 368 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 SP2Q02086 613 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 CYFIP1Q7L576 1253 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 CCDC105Q8IYK2 499 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 KIAA2013Q8IYS2 634 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 ZDHHC14Q8IZN3 488 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 ACSF2Q96CM8 615 aaPredicted RBP12.88□□□□□ -0.35
CASC3-208ENST00000583649 GPR20Q99678 358 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 OSBPL7Q9BZF2 842 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 ADAM7Q9H2U9 754 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 VAT1LQ9HCJ6 419 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 ERAP1Q9NZ08 941 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 FBXL21Q9UKT6 434 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 CDY2AQ9Y6F7 541 aa12.88□□□□□ -0.35
CASC3-208ENST00000583649 RIF1Q5UIP0 2472 aaKnown RBP12.87□□□□□ -0.35
CASC3-208ENST00000583649 RRN3P2A6NIE6 340 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 STK25O00506 426 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 KRT37O76014 449 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 LAG3P18627 525 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 AOC1P19801 751 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 ADAM17P78536 824 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 MRPS6P82932 125 aaKnown RBP12.87□□□□□ -0.35
CASC3-208ENST00000583649 GHRHRQ02643 423 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 MGAT3Q09327 533 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 ATAT1Q5SQI0 421 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 LLGL2Q6P1M3 1020 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 DTWD2Q8NBA8 298 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 DNAJB3Q8WWF6 145 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 TCF25Q9BQ70 676 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 APOL5Q9BWW9 433 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 HELLSQ9NRZ9 838 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
CASC3-208ENST00000583649 DBR1Q9UK59 544 aaKnown RBP12.87□□□□□ -0.35
CASC3-208ENST00000583649 USTQ9Y2C2 406 aa12.87□□□□□ -0.35
CASC3-208ENST00000583649 MYH7BA7E2Y1 1941 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 C2CD4DB7Z1M9 353 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 CCER2I3L3R5 266 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 CD52P31358 61 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 PPM1AP35813 382 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 GRIK4Q16099 956 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 PLPP4Q5VZY2 271 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 TSHZ3Q63HK5 1081 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 NLRX1Q86UT6 975 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 FCHSD1Q86WN1 690 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 RUBCNQ92622 972 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 GLG1Q92896 1179 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 CNTNAP3BQ96NU0 1288 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 SENP7Q9BQF6 1050 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 CNTNAP3Q9BZ76 1288 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 C1orf112Q9NSG2 853 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 ATG2AQ2TAZ0 1938 aa12.86□□□□□ -0.35
CASC3-208ENST00000583649 DENND3A2RUS2 1198 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 TBKBP1A7MCY6 615 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 FGAP02671 866 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 IBSPP21815 317 aaPredicted RBP12.85□□□□□ -0.35
CASC3-208ENST00000583649 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
CASC3-208ENST00000583649 SARSP49591 514 aaKnown RBP12.85□□□□□ -0.35
CASC3-208ENST00000583649 MFAP1P55081 439 aaKnown RBP12.85□□□□□ -0.35
CASC3-208ENST00000583649 ERVFC1P60507 584 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 NONOQ15233 471 aaKnown RBP eCLIP12.85□□□□□ -0.35
CASC3-208ENST00000583649 SYCE2Q6PIF2 218 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 TMC7Q7Z402 723 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 TRIM50Q86XT4 487 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 GPR161Q8N6U8 529 aaKnown RBP12.85□□□□□ -0.35
CASC3-208ENST00000583649 VN1R2Q8NFZ6 395 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 CYP2W1Q8TAV3 490 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 MRPS27Q92552 414 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms