RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 TCEAL5Q5H9L2 206 aa11.17□□□□□ -0.62
MKS1-212ENST00000583577 FAM117BQ6P1L5 589 aa11.17□□□□□ -0.62
MKS1-212ENST00000583577 CHST3Q7LGC8 479 aa11.17□□□□□ -0.62
MKS1-212ENST00000583577 ZNF467Q7Z7K2 595 aaPredicted RBP11.17□□□□□ -0.62
MKS1-212ENST00000583577 FERMT3Q86UX7 667 aa11.17□□□□□ -0.62
MKS1-212ENST00000583577 FAM160B2Q86V87 743 aa11.17□□□□□ -0.62
MKS1-212ENST00000583577 PRPF38AQ8NAV1 312 aaKnown RBP11.17□□□□□ -0.62
MKS1-212ENST00000583577 ENGASEQ8NFI3 743 aa11.17□□□□□ -0.62
MKS1-212ENST00000583577 CHURC1Q8WUH1 139 aa11.17□□□□□ -0.62
MKS1-212ENST00000583577 MRPS27Q92552 414 aaKnown RBP11.17□□□□□ -0.62
MKS1-212ENST00000583577 MRPL38Q96DV4 380 aaKnown RBP11.17□□□□□ -0.62
MKS1-212ENST00000583577 TMEM87BQ96K49 555 aa11.17□□□□□ -0.62
MKS1-212ENST00000583577 GTPBP4Q9BZE4 634 aaKnown RBP11.17□□□□□ -0.62
MKS1-212ENST00000583577 CGNQ9P2M7 1197 aaKnown RBP11.17□□□□□ -0.62
MKS1-212ENST00000583577 ZNF214Q9UL59 606 aaPredicted RBP11.17□□□□□ -0.62
MKS1-212ENST00000583577 ADAMTS5Q9UNA0 930 aa11.17□□□□□ -0.62
MKS1-212ENST00000583577 CTDP1Q9Y5B0 961 aaPredicted RBP11.17□□□□□ -0.62
MKS1-212ENST00000583577 SCN10AQ9Y5Y9 1956 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 DNAJC25-GNG10A0A024R161 153 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 PROB1E7EW31 1015 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 STXBP3O00186 592 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 BAIAP3O94812 1187 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 IQCF3P0C7M6 154 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 STAT2P52630 851 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 ANTXR2P58335 489 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 RBM10P98175 930 aaKnown RBP11.16□□□□□ -0.62
MKS1-212ENST00000583577 PTPROQ16827 1216 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 SNRNP48Q6IEG0 339 aaKnown RBP11.16□□□□□ -0.62
MKS1-212ENST00000583577 CPLX2Q6PUV4 134 aaKnown RBP11.16□□□□□ -0.62
MKS1-212ENST00000583577 CCDC186Q7Z3E2 898 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 LUZP1Q86V48 1076 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 CREBRFQ8IUR6 639 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 CCDC144CPQ8IYA2 1237 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 CCDC150Q8NCX0 1101 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 BANK1Q8NDB2 785 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 CNTNAP3BQ96NU0 1288 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 RAD9AQ99638 391 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 SLF1Q9BQI6 1058 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 LARP6Q9BRS8 491 aaKnown RBP11.16□□□□□ -0.62
MKS1-212ENST00000583577 C17orf80Q9BSJ5 609 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 CNTNAP3Q9BZ76 1288 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 PPP1R9AQ9ULJ8 1098 aa11.16□□□□□ -0.62
MKS1-212ENST00000583577 IKBKBO14920 756 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 AP5Z1O43299 807 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 PLA2G6O60733 806 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 ZBED4O75132 1171 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 FDX1P10109 184 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 PDHBP11177 359 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 PDIA3P30101 505 aaKnown RBP11.15□□□□□ -0.62
MKS1-212ENST00000583577 AVPR2P30518 371 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 ZXDAP98168 799 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 SMAD2Q15796 467 aaKnown RBP11.15□□□□□ -0.62
MKS1-212ENST00000583577 TIGD5Q53EQ6 642 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 FAM47CQ5HY64 1035 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 GPATCH4Q5T3I0 446 aaKnown RBP11.15□□□□□ -0.62
MKS1-212ENST00000583577 NFXL1Q6ZNB6 911 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 KCTD1Q719H9 257 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 LRRC8AQ8IWT6 810 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 CCDC112Q8NEF3 446 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 REPS2Q8NFH8 660 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 IGDCC4Q8TDY8 1250 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 PPP1R13LQ8WUF5 828 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 KIFC2Q96AC6 838 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 FGD4Q96M96 766 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 KATNBL1Q9H079 304 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 TFIP11Q9UBB9 837 aaKnown RBP11.15□□□□□ -0.62
MKS1-212ENST00000583577 PYCARDQ9ULZ3 195 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 RIPK3Q9Y572 518 aa11.15□□□□□ -0.62
MKS1-212ENST00000583577 FRMPD2Q68DX3 1309 aaPredicted RBP11.14□□□□□ -0.63
MKS1-212ENST00000583577 CCDC69A6NI79 296 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 SH2B2O14492 632 aaPredicted RBP11.14□□□□□ -0.63
MKS1-212ENST00000583577 RIOK3O14730 519 aaKnown RBP11.14□□□□□ -0.63
MKS1-212ENST00000583577 MBTPS2O43462 519 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 JAK2O60674 1132 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 GJB5O95377 273 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 LIFRP42702 1097 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 ZNF543Q08ER8 600 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 STK3Q13188 491 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 SNW1Q13573 536 aaKnown RBP11.14□□□□□ -0.63
MKS1-212ENST00000583577 CAMK4Q16566 473 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 ASPRV1Q53RT3 343 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 RASGRP2Q7LDG7 609 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 DGLUCYQ7Z3D6 616 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 CATIPQ7Z7H3 387 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 RPAINQ86UA6 219 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 CKAP2LQ8IYA6 745 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 ADSSL1Q8N142 457 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 ANKRD35Q8N283 1001 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 ZNF830Q96NB3 372 aaPredicted RBP11.14□□□□□ -0.63
MKS1-212ENST00000583577 TEX13BQ9BXU2 312 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 ZMYND15Q9H091 742 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 DNAJC25Q9H1X3 360 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 LY9Q9HBG7 655 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 GPCPD1Q9NPB8 672 aa11.14□□□□□ -0.63
MKS1-212ENST00000583577 GNEQ9Y223 722 aaKnown RBP11.14□□□□□ -0.63
MKS1-212ENST00000583577 MORC2Q9Y6X9 1032 aaPredicted RBP11.14□□□□□ -0.63
MKS1-212ENST00000583577 FAM237AA0A1B0GTK4 181 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 PPP6R2O75170 966 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms