RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ZNF654Q8IZM8 581 aa18.59■□□□□ 0.57
SREBF1-221ENST00000583080 GPRASP2Q96D09 838 aa18.59■□□□□ 0.57
SREBF1-221ENST00000583080 RRP36Q96EU6 259 aaKnown RBP18.59■□□□□ 0.57
SREBF1-221ENST00000583080 FBXL18Q96ME1 805 aa18.59■□□□□ 0.57
SREBF1-221ENST00000583080 IGFLR1Q9H665 355 aa18.59■□□□□ 0.57
SREBF1-221ENST00000583080 ALG13Q9NP73 1137 aaKnown RBP18.59■□□□□ 0.57
SREBF1-221ENST00000583080 MUTYHQ9UIF7 546 aa18.59■□□□□ 0.57
SREBF1-221ENST00000583080 RWDD3Q9Y3V2 267 aa18.59■□□□□ 0.57
SREBF1-221ENST00000583080 MRPL42Q9Y6G3 142 aaKnown RBP18.59■□□□□ 0.57
SREBF1-221ENST00000583080 NCK2O43639 380 aa18.58■□□□□ 0.56
SREBF1-221ENST00000583080 DGKIO75912 1065 aa18.58■□□□□ 0.56
SREBF1-221ENST00000583080 CHMLP26374 656 aa18.58■□□□□ 0.56
SREBF1-221ENST00000583080 CD52P31358 61 aa18.58■□□□□ 0.56
SREBF1-221ENST00000583080 IGBP1P78318 339 aa18.58■□□□□ 0.56
SREBF1-221ENST00000583080 NHLH1Q02575 133 aa18.58■□□□□ 0.56
SREBF1-221ENST00000583080 SMAD4Q13485 552 aaKnown RBP18.58■□□□□ 0.56
SREBF1-221ENST00000583080 TSHZ1Q6ZSZ6 1077 aa18.58■□□□□ 0.56
SREBF1-221ENST00000583080 GIMAP8Q8ND71 665 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-221ENST00000583080 FAM49AQ9H0Q0 323 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-221ENST00000583080 LY9Q9HBG7 655 aa18.58■□□□□ 0.56
SREBF1-221ENST00000583080 ERAP1Q9NZ08 941 aa18.58■□□□□ 0.56
SREBF1-221ENST00000583080 DDAH1O94760 285 aa18.57■□□□□ 0.56
SREBF1-221ENST00000583080 DNAJB1P25685 340 aa18.57■□□□□ 0.56
SREBF1-221ENST00000583080 MRE11P49959 708 aa18.57■□□□□ 0.56
SREBF1-221ENST00000583080 MRPS6P82932 125 aaKnown RBP18.57■□□□□ 0.56
SREBF1-221ENST00000583080 UBE2SQ16763 222 aa18.57■□□□□ 0.56
SREBF1-221ENST00000583080 ADGRD2Q7Z7M1 963 aa18.57■□□□□ 0.56
SREBF1-221ENST00000583080 RSPH3Q86UC2 560 aa18.57■□□□□ 0.56
SREBF1-221ENST00000583080 CMTR1Q8N1G2 835 aaKnown RBP18.57■□□□□ 0.56
SREBF1-221ENST00000583080 CTCFLQ8NI51 663 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-221ENST00000583080 SEPT1Q8WYJ6 367 aa18.57■□□□□ 0.56
SREBF1-221ENST00000583080 GLG1Q92896 1179 aa18.57■□□□□ 0.56
SREBF1-221ENST00000583080 SEC63Q9UGP8 760 aaKnown RBP18.57■□□□□ 0.56
SREBF1-221ENST00000583080 PLAGL2Q9UPG8 496 aa18.57■□□□□ 0.56
SREBF1-221ENST00000583080 TECTAO75443 2155 aa18.57■□□□□ 0.56
SREBF1-221ENST00000583080 RXRAP19793 462 aa18.56■□□□□ 0.56
SREBF1-221ENST00000583080 TMEM62Q0P6H9 643 aa18.56■□□□□ 0.56
SREBF1-221ENST00000583080 COL9A3Q14050 684 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-221ENST00000583080 RTN4RL1Q86UN2 441 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-221ENST00000583080 CRIPAKQ8N1N5 446 aa18.56■□□□□ 0.56
SREBF1-221ENST00000583080 SRBD1Q8N5C6 995 aaKnown RBP18.56■□□□□ 0.56
SREBF1-221ENST00000583080 PCYT2Q99447 389 aa18.56■□□□□ 0.56
SREBF1-221ENST00000583080 PLVAPQ9BX97 442 aa18.56■□□□□ 0.56
SREBF1-221ENST00000583080 CD207Q9UJ71 328 aa18.56■□□□□ 0.56
SREBF1-221ENST00000583080 UBIAD1Q9Y5Z9 338 aa18.56■□□□□ 0.56
SREBF1-221ENST00000583080 hCG_1642624A0A1W2PR95 340 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 ITGB1P05556 798 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 KIF5BP33176 963 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 GATMP50440 423 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 MTMR1Q13613 665 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 PAN2Q504Q3 1202 aaKnown RBP18.55■□□□□ 0.56
SREBF1-221ENST00000583080 HERC4Q5GLZ8 1057 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-221ENST00000583080 RNF135Q8IUD6 432 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 TRAPPC12Q8WVT3 735 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 RUFY2Q8WXA3 655 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 CDHR1Q96JP9 859 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 MAP3K14Q99558 947 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 UPF3BQ9BZI7 483 aaKnown RBP18.55■□□□□ 0.56
SREBF1-221ENST00000583080 SMARCAD1Q9H4L7 1026 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 WDFY4Q6ZS81 3184 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 LOXHD1Q8IVV2 1947 aa18.55■□□□□ 0.56
SREBF1-221ENST00000583080 STXBP3O00186 592 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 SGSM2O43147 1006 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 INSRRP14616 1297 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 NDUFV1P49821 464 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 ADAM15Q13444 863 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 RAB11FIP4Q86YS3 637 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 CMTR2Q8IYT2 770 aaKnown RBP18.54■□□□□ 0.56
SREBF1-221ENST00000583080 P2RX5Q93086 422 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 MSLNLQ96KJ4 702 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 POP1Q99575 1024 aaKnown RBP18.54■□□□□ 0.56
SREBF1-221ENST00000583080 PSTPIP2Q9H939 334 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 CLEC1BQ9P126 229 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 PCDHGC5Q9Y5F6 944 aa18.54■□□□□ 0.56
SREBF1-221ENST00000583080 SMARCA1P28370 1054 aa18.53■□□□□ 0.56
SREBF1-221ENST00000583080 NPAS4Q8IUM7 802 aa18.53■□□□□ 0.56
SREBF1-221ENST00000583080 KLHL23Q8NBE8 558 aa18.53■□□□□ 0.56
SREBF1-221ENST00000583080 SPPL3Q8TCT6 385 aa18.53■□□□□ 0.56
SREBF1-221ENST00000583080 PLXNA4Q9HCM2 1894 aa18.53■□□□□ 0.56
SREBF1-221ENST00000583080 JPH1Q9HDC5 661 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-221ENST00000583080 JADE2Q9NQC1 790 aa18.53■□□□□ 0.56
SREBF1-221ENST00000583080 TRPV2Q9Y5S1 764 aa18.53■□□□□ 0.56
SREBF1-221ENST00000583080 RBM8AQ9Y5S9 174 aaKnown RBP18.53■□□□□ 0.56
SREBF1-221ENST00000583080 TRIOO75962 3097 aa18.53■□□□□ 0.56
SREBF1-221ENST00000583080 SH2B2O14492 632 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-221ENST00000583080 PRC1O43663 620 aa18.52■□□□□ 0.56
SREBF1-221ENST00000583080 MAP4K1Q92918 833 aa18.52■□□□□ 0.56
SREBF1-221ENST00000583080 LZTS2Q9BRK4 669 aa18.52■□□□□ 0.56
SREBF1-221ENST00000583080 KCNH6Q9H252 994 aa18.52■□□□□ 0.56
SREBF1-221ENST00000583080 TMX1Q9H3N1 280 aa18.52■□□□□ 0.56
SREBF1-221ENST00000583080 PADI3Q9ULW8 664 aa18.52■□□□□ 0.56
SREBF1-221ENST00000583080 TRPC6Q9Y210 931 aa18.52■□□□□ 0.56
SREBF1-221ENST00000583080 IGSF9BQ9UPX0 1349 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 SPDYE3A6NKU9 549 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 EYA4O95677 639 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 GLP2RO95838 553 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 SCG2P13521 617 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 IBSPP21815 317 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-221ENST00000583080 NRIP1P48552 1158 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 PAK2Q13177 524 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms