RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ANTXR2P58335 489 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 BTG3Q14201 252 aaPredicted RBP15.59■□□□□ 0.09
SS18-222ENST00000582792 CLUL1Q15846 466 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 MARCH8Q5T0T0 291 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 TTC22Q5TAA0 569 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 TSHZ1Q6ZSZ6 1077 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 DNAJB3Q8WWF6 145 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 RUFY2Q8WXA3 655 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 CDHR1Q96JP9 859 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 PLVAPQ9BX97 442 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 CDY2AQ9Y6F7 541 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 DDAH1O94760 285 aa15.58■□□□□ 0.08
SS18-222ENST00000582792 ITGB5P18084 799 aa15.58■□□□□ 0.08
SS18-222ENST00000582792 MARK3P27448 753 aa15.58■□□□□ 0.08
SS18-222ENST00000582792 KIF5BP33176 963 aa15.58■□□□□ 0.08
SS18-222ENST00000582792 GTF2F1P35269 517 aaKnown RBP eCLIP15.58■□□□□ 0.08
SS18-222ENST00000582792 NHLH1Q02575 133 aa15.58■□□□□ 0.08
SS18-222ENST00000582792 SMAD4Q13485 552 aaKnown RBP15.58■□□□□ 0.08
SS18-222ENST00000582792 MB21D2Q8IYB1 491 aaPredicted RBP15.58■□□□□ 0.08
SS18-222ENST00000582792 CTCFLQ8NI51 663 aaPredicted RBP15.58■□□□□ 0.08
SS18-222ENST00000582792 P2RX5Q93086 422 aa15.58■□□□□ 0.08
SS18-222ENST00000582792 FBXL18Q96ME1 805 aa15.58■□□□□ 0.08
SS18-222ENST00000582792 SEC63Q9UGP8 760 aaKnown RBP15.58■□□□□ 0.08
SS18-222ENST00000582792 TBX10O75333 385 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 RPLP2P05387 115 aaKnown RBP15.57■□□□□ 0.08
SS18-222ENST00000582792 CHMLP26374 656 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 MRPS6P82932 125 aaKnown RBP15.57■□□□□ 0.08
SS18-222ENST00000582792 CAMK1Q14012 370 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 HERC4Q5GLZ8 1057 aaPredicted RBP15.57■□□□□ 0.08
SS18-222ENST00000582792 HFE2Q6ZVN8 426 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 ZNF654Q8IZM8 581 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 LINC01599Q8WXQ3 324 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 GLG1Q92896 1179 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 LZTS2Q9BRK4 669 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 MYL10Q9BUA6 226 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 SMARCAD1Q9H4L7 1026 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 IGFLR1Q9H665 355 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 PSTPIP2Q9H939 334 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 AGO3Q9H9G7 860 aaKnown RBP15.57■□□□□ 0.08
SS18-222ENST00000582792 LY9Q9HBG7 655 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 ALG13Q9NP73 1137 aaKnown RBP15.57■□□□□ 0.08
SS18-222ENST00000582792 CD207Q9UJ71 328 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 PLAGL2Q9UPG8 496 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 UBIAD1Q9Y5Z9 338 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 SQORQ9Y6N5 450 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 ZNF318Q5VUA4 2279 aa15.57■□□□□ 0.08
SS18-222ENST00000582792 LINC01565O15544 149 aa15.56■□□□□ 0.08
SS18-222ENST00000582792 CD52P31358 61 aa15.56■□□□□ 0.08
SS18-222ENST00000582792 MRE11P49959 708 aa15.56■□□□□ 0.08
SS18-222ENST00000582792 ADAM15Q13444 863 aa15.56■□□□□ 0.08
SS18-222ENST00000582792 MTMR1Q13613 665 aa15.56■□□□□ 0.08
SS18-222ENST00000582792 NAALADL2Q58DX5 795 aa15.56■□□□□ 0.08
SS18-222ENST00000582792 CMTR2Q8IYT2 770 aaKnown RBP15.56■□□□□ 0.08
SS18-222ENST00000582792 CRIPAKQ8N1N5 446 aa15.56■□□□□ 0.08
SS18-222ENST00000582792 FTHL17Q9BXU8 183 aa15.56■□□□□ 0.08
SS18-222ENST00000582792 MUTYHQ9UIF7 546 aa15.56■□□□□ 0.08
SS18-222ENST00000582792 MRPL42Q9Y6G3 142 aaKnown RBP15.56■□□□□ 0.08
SS18-222ENST00000582792 KIAA1671Q9BY89 1806 aa15.56■□□□□ 0.08
SS18-222ENST00000582792 RRN3P2A6NIE6 340 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 STXBP3O00186 592 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 MAFGO15525 162 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 CSPG5O95196 566 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 PLEKHA8P1O95397 391 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 INSRRP14616 1297 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 DNAJB1P25685 340 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 GNAQP50148 359 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 IGBP1P78318 339 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 IER5Q5VY09 327 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 RTN4RL1Q86UN2 441 aaPredicted RBP15.55■□□□□ 0.08
SS18-222ENST00000582792 RNF135Q8IUD6 432 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 SRBD1Q8N5C6 995 aaKnown RBP15.55■□□□□ 0.08
SS18-222ENST00000582792 PPP2R3CQ969Q6 453 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 ZBTB10Q96DT7 871 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 MSLNLQ96KJ4 702 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 MFSD14AQ96MC6 490 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 PCYT2Q99447 389 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 MTA3Q9BTC8 594 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 JADE2Q9NQC1 790 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 PKD2L1Q9P0L9 805 aa15.55■□□□□ 0.08
SS18-222ENST00000582792 SGSM2O43147 1006 aa15.54■□□□□ 0.08
SS18-222ENST00000582792 EYA4O95677 639 aa15.54■□□□□ 0.08
SS18-222ENST00000582792 ITGB1P05556 798 aa15.54■□□□□ 0.08
SS18-222ENST00000582792 NDUFV1P49821 464 aa15.54■□□□□ 0.08
SS18-222ENST00000582792 UBE2SQ16763 222 aa15.54■□□□□ 0.08
SS18-222ENST00000582792 SPPL3Q8TCT6 385 aa15.54■□□□□ 0.08
SS18-222ENST00000582792 MAP4K1Q92918 833 aa15.54■□□□□ 0.08
SS18-222ENST00000582792 FAM49AQ9H0Q0 323 aaPredicted RBP15.54■□□□□ 0.08
SS18-222ENST00000582792 TRPV2Q9Y5S1 764 aa15.54■□□□□ 0.08
SS18-222ENST00000582792 IGSF9BQ9UPX0 1349 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 SPDYE3A6NKU9 549 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 M0QZ92 97 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 PRC1O43663 620 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 STAG3L1P0CL83 205 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 CASC1Q6TDU7 716 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 ADGRD2Q7Z7M1 963 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 CMTR1Q8N1G2 835 aaKnown RBP15.53■□□□□ 0.08
SS18-222ENST00000582792 TMTC2Q8N394 836 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 EFHBQ8N7U6 833 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 KLHL23Q8NBE8 558 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms