RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 YBX2Q9Y2T7 364 aaKnown RBP21.28■■□□□ 1
LIMS2-218ENST00000582671 TMEM265A0A087WTH1 108 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 RSPH10B2B2RC85 870 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 PARNO95453 639 aaKnown RBP21.27■■□□□ 1
LIMS2-218ENST00000582671 RSPH10BP0C881 870 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 STAT5BP51692 787 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 USP11P51784 963 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 SETQ01105 290 aaPredicted RBP21.27■■□□□ 1
LIMS2-218ENST00000582671 ST3GAL1Q11201 340 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 PPFIA1Q13136 1202 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 PLCB4Q15147 1175 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 GRIK4Q16099 956 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 MARCH8Q5T0T0 291 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 ABHD15Q6UXT9 468 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 RUFY4Q6ZNE9 571 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 PLPPR4Q7Z2D5 763 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 ZBTB10Q96DT7 871 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 CDX2Q99626 313 aaPredicted RBP21.27■■□□□ 1
LIMS2-218ENST00000582671 KIF2CQ99661 725 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 PHF20Q9BVI0 1012 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 STXBP5LQ9Y2K9 1186 aa21.27■■□□□ 1
LIMS2-218ENST00000582671 MYO9BQ13459 2157 aa21.26■□□□□ 0.99
LIMS2-218ENST00000582671 INSRRP14616 1297 aa21.26■□□□□ 0.99
LIMS2-218ENST00000582671 MYOGP15173 224 aa21.26■□□□□ 0.99
LIMS2-218ENST00000582671 ATP2A2P16615 1042 aaKnown RBP21.26■□□□□ 0.99
LIMS2-218ENST00000582671 GALNT17Q6IS24 598 aa21.26■□□□□ 0.99
LIMS2-218ENST00000582671 FAM177A1Q8N128 213 aaPredicted RBP21.26■□□□□ 0.99
LIMS2-218ENST00000582671 AZI2Q9H6S1 392 aa21.26■□□□□ 0.99
LIMS2-218ENST00000582671 ORC3Q9UBD5 711 aaPredicted RBP21.26■□□□□ 0.99
LIMS2-218ENST00000582671 MBLAC1A4D2B0 266 aaPredicted RBP21.25■□□□□ 0.99
LIMS2-218ENST00000582671 MSH4O15457 936 aa21.25■□□□□ 0.99
LIMS2-218ENST00000582671 BAIAP3O94812 1187 aa21.25■□□□□ 0.99
LIMS2-218ENST00000582671 CTSHP09668 335 aa21.25■□□□□ 0.99
LIMS2-218ENST00000582671 GRIN2CQ14957 1233 aa21.25■□□□□ 0.99
LIMS2-218ENST00000582671 CNKSR3Q6P9H4 555 aa21.25■□□□□ 0.99
LIMS2-218ENST00000582671 CCDC60Q8IWA6 550 aaPredicted RBP21.25■□□□□ 0.99
LIMS2-218ENST00000582671 NKX2-4Q9H2Z4 354 aa21.25■□□□□ 0.99
LIMS2-218ENST00000582671 ZNF576Q9H609 170 aa21.25■□□□□ 0.99
LIMS2-218ENST00000582671 TBC1D22BQ9NU19 505 aa21.25■□□□□ 0.99
LIMS2-218ENST00000582671 CAND2O75155 1236 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 TDP2O95551 362 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 IGBP1P78318 339 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 RAB30Q15771 203 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 NSUN7Q8NE18 718 aaKnown RBP21.24■□□□□ 0.99
LIMS2-218ENST00000582671 OXER1Q8TDS5 423 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 TRAPPC12Q8WVT3 735 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 GJA10Q969M2 543 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 SLC9A7Q96T83 725 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 C22orf23Q9BZE7 217 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 MSRAQ9UJ68 235 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 TUBE1Q9UJT0 475 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 TRPC6Q9Y210 931 aa21.24■□□□□ 0.99
LIMS2-218ENST00000582671 JAK2O60674 1132 aa21.23■□□□□ 0.99
LIMS2-218ENST00000582671 ATP4AP20648 1035 aa21.23■□□□□ 0.99
LIMS2-218ENST00000582671 WDR5P61964 334 aaKnown RBP21.23■□□□□ 0.99
LIMS2-218ENST00000582671 FAM26DQ5JW98 314 aa21.23■□□□□ 0.99
LIMS2-218ENST00000582671 ZNF746Q6NUN9 644 aaPredicted RBP21.23■□□□□ 0.99
LIMS2-218ENST00000582671 SWSAP1Q6NVH7 229 aa21.23■□□□□ 0.99
LIMS2-218ENST00000582671 MIS18BP1Q6P0N0 1132 aa21.23■□□□□ 0.99
LIMS2-218ENST00000582671 TMCO2Q7Z6W1 182 aaPredicted RBP21.23■□□□□ 0.99
LIMS2-218ENST00000582671 DBF4BQ8NFT6 615 aa21.23■□□□□ 0.99
LIMS2-218ENST00000582671 MYLIPQ8WY64 445 aa21.23■□□□□ 0.99
LIMS2-218ENST00000582671 ZNF302Q9NR11 478 aa21.23■□□□□ 0.99
LIMS2-218ENST00000582671 CYP3A7-CYP3A51PA0A087WV96 503 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 BACH1O14867 736 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 CHRNA1P02708 482 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 CYP3A7P24462 503 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 DEFB103AP81534 67 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 NONOQ15233 471 aaKnown RBP eCLIP21.22■□□□□ 0.99
LIMS2-218ENST00000582671 INF2Q27J81 1249 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 Q4G0T1 1027 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 TAF2Q6P1X5 1199 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 HERC6Q8IVU3 1022 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 PHOSPHO2Q8TCD6 241 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 DNAJB3Q8WWF6 145 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 SLC5A5Q92911 643 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 MBOAT7Q96N66 472 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 PCDHA11Q9Y5I1 949 aa21.22■□□□□ 0.99
LIMS2-218ENST00000582671 ABHD14A-ACY1A0A1B0GW23 586 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 POTEB3A0JP26 581 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 RRN3P2A6NIE6 340 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 SLC26A2P50443 739 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 KRT76Q01546 638 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 MGAT3Q09327 533 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 MKRN4PQ13434 485 aaPredicted RBP21.21■□□□□ 0.99
LIMS2-218ENST00000582671 PLEKHG4Q58EX7 1191 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 EARS2Q5JPH6 523 aaKnown RBP21.21■□□□□ 0.99
LIMS2-218ENST00000582671 FAM160B1Q5W0V3 765 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 POTEBQ6S5H4 581 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 KRT25Q7Z3Z0 450 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 RPAINQ86UA6 219 aa21.21■□□□□ 0.99
LIMS2-218ENST00000582671 MAFBQ9Y5Q3 323 aaPredicted RBP21.21■□□□□ 0.99
LIMS2-218ENST00000582671 CDH23Q9H251 3354 aa21.2■□□□□ 0.99
LIMS2-218ENST00000582671 XBP1P17861 261 aa21.2■□□□□ 0.98
LIMS2-218ENST00000582671 KCNJ6P48051 423 aa21.2■□□□□ 0.98
LIMS2-218ENST00000582671 IKBKEQ14164 716 aa21.2■□□□□ 0.98
LIMS2-218ENST00000582671 PDXDC2PQ6P474 469 aa21.2■□□□□ 0.98
LIMS2-218ENST00000582671 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.2■□□□□ 0.98
LIMS2-218ENST00000582671 SMAP1Q8IYB5 467 aaPredicted RBP21.2■□□□□ 0.98
LIMS2-218ENST00000582671 ATP8B4Q8TF62 1192 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms