RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 CYP21A2P08686 494 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 CPB1P15086 417 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 GUCY1A2P33402 732 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 SHMT1P34896 483 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 CHRNA4P43681 627 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 SMAD3P84022 425 aaKnown RBP11.89□□□□□ -0.51
SS18-221ENST00000582448 TLE2Q04725 743 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 LRRC41Q15345 812 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 FAM47AQ5JRC9 791 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 OLFML2BQ68BL8 750 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 LBX2Q6XYB7 198 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 CD163Q86VB7 1156 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 RNPC3Q96LT9 517 aaKnown RBP11.89□□□□□ -0.51
SS18-221ENST00000582448 TTC14Q96N46 770 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 NAPBQ9H115 298 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 EHD4Q9H223 541 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 JPH1Q9HDC5 661 aaPredicted RBP11.89□□□□□ -0.51
SS18-221ENST00000582448 PDLIM7Q9NR12 457 aa11.89□□□□□ -0.51
SS18-221ENST00000582448 ZMYM6O95789 1325 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 A0A1W2PRG0 241 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 C1QTNF9BB2RNN3 333 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 LILRB5O75023 590 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 TDO2P48775 406 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 PLAURQ03405 335 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 CUL4AQ13619 759 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 PHLDB3Q6NSJ2 640 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 FAM35AQ86V20 835 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 SPICE1Q8N0Z3 855 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 PPM1EQ8WY54 764 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 GBP4Q96PP9 640 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 STRBPQ96SI9 672 aaKnown RBP11.88□□□□□ -0.51
SS18-221ENST00000582448 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
SS18-221ENST00000582448 E7EWF7 191 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 PQBP1O60828 265 aaKnown RBP11.87□□□□□ -0.51
SS18-221ENST00000582448 MMP20O60882 483 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 FLOT1O75955 427 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 PGK1P00558 417 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 FGAP02671 866 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 RAG1P15918 1043 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 PTMSP20962 102 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 ITGB8P26012 769 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 GPLD1P80108 840 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 ALX1Q15699 326 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 KIAA1755Q5JYT7 1200 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 PERM1Q5SV97 790 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 HFE2Q6ZVN8 426 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 CERS3Q8IU89 383 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 NCOA7Q8NI08 942 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 GPR152Q8TDT2 470 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 LPIN3Q9BQK8 851 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 ARMT1Q9H993 441 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 XPNPEP3Q9NQH7 507 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 SLC4A4Q9Y6R1 1079 aa11.87□□□□□ -0.51
SS18-221ENST00000582448 CUL9Q8IWT3 2517 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 GOLGA6L22H0YM25 854 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 CLTBP09497 229 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 CYP2D6P10635 497 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 RARBP10826 455 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 FCER1AP12319 257 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 PDIA4P13667 645 aaKnown RBP11.86□□□□□ -0.51
SS18-221ENST00000582448 CPA1P15085 419 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 AFF1P51825 1210 aaKnown RBP11.86□□□□□ -0.51
SS18-221ENST00000582448 EPHB4P54760 987 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 NFKBIBQ15653 356 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 ATCAYQ86WG3 371 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 SHCBP1Q8NEM2 672 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 ATG4CQ96DT6 458 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 MMP19Q99542 508 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 ARID3AQ99856 593 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 CRNKL1Q9BZJ0 848 aaKnown RBP11.86□□□□□ -0.51
SS18-221ENST00000582448 RNF41Q9H4P4 317 aaPredicted RBP11.86□□□□□ -0.51
SS18-221ENST00000582448 TMEM39AQ9NV64 488 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 SMC3Q9UQE7 1217 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 DNAH12Q6ZR08 3092 aa11.86□□□□□ -0.51
SS18-221ENST00000582448 RGS9O75916 674 aaPredicted RBP11.85□□□□□ -0.51
SS18-221ENST00000582448 IGHA2P01877 340 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 PGK2P07205 417 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 SPATA31C1P0DKV0 1188 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 TAL1P17542 331 aaPredicted RBP11.85□□□□□ -0.51
SS18-221ENST00000582448 MCM5P33992 734 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 DDIT3P35638 169 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 NRLP54845 237 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 SNX17Q15036 470 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 Q6ZUG5 572 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 RNF180Q86T96 592 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 CLEC10AQ8IUN9 316 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 IFNL3Q8IZI9 196 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 MB21D1Q8N884 522 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 SLC44A5Q8NCS7 719 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 HELQQ8TDG4 1101 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 SDR42E1Q8WUS8 393 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 PIK3R5Q8WYR1 880 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 DYNLL2Q96FJ2 89 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 MROH8Q9H579 483 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 CNNM2Q9H8M5 875 aa11.85□□□□□ -0.51
SS18-221ENST00000582448 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.84□□□□□ -0.51
SS18-221ENST00000582448 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.84□□□□□ -0.51
SS18-221ENST00000582448 SLC3A2P08195 630 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms