RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	IBSP	P21815	317 aa	Predicted RBP	13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	CTNNB1	P35222	781 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	ADCY7	P51828	1080 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	RNF20	Q5VTR2	975 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	TAF2	Q6P1X5	1199 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	RSPH3	Q86UC2	560 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	RASEF	Q8IZ41	740 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	MRPL38	Q96DV4	380 aa	Known RBP	13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	IL17RA	Q96F46	866 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	MXRA8	Q9BRK3	442 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	KCNH7	Q9NS40	1196 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	RBM28	Q9NW13	759 aa	Known RBP	13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	SLC9A2	Q9UBY0	812 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114		V9GY48	417 aa	Predicted RBP	13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	BDP1	A6H8Y1	2624 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	KLF18	A0A0U1RQI7	1052 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114		H3BNC9	293 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114		H3BQ06	376 aa	Predicted RBP	13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	STXBP3	O00186	592 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	CPA1	P15085	419 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	CD52	P31358	61 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	ACTR2	P61160	394 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	EXOSC10	Q01780	885 aa	Known RBP	13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	FUT2	Q10981	343 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	PTPRO	Q16827	1216 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	BMP2KL	Q5H9B9	411 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	TCEAL5	Q5H9L2	206 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	FBXO47	Q5MNV8	452 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	DHX32	Q7L7V1	743 aa	Known RBP	13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	FIBCD1	Q8N539	461 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	BANK1	Q8NDB2	785 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	SAMD11	Q96NU1	681 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	SDF4	Q9BRK5	362 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	ANO3	Q9BYT9	981 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	AZI2	Q9H6S1	392 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	AGO3	Q9H9G7	860 aa	Known RBP	13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	CD320	Q9NPF0	282 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	RIC8A	Q9NPQ8	531 aa		13.29	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	FAM86C2P	A6NEL3	165 aa		13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	SMCO2	A6NFE2	343 aa		13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	ENPP3	O14638	875 aa		13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	IL9	P15248	144 aa		13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	CDC27	P30260	824 aa		13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	MRPS6	P82932	125 aa	Known RBP	13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	ITGB3BP	Q13352	177 aa	Predicted RBP	13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	PLCB4	Q15147	1175 aa		13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	TSHZ1	Q6ZSZ6	1077 aa		13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	RPAIN	Q86UA6	219 aa		13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	LINC01599	Q8WXQ3	324 aa		13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	AGO4	Q9HCK5	861 aa	Known RBP	13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.28	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	RRN3P2	A6NIE6	340 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	MAFG	O15525	162 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ZNF76	P36508	570 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	STAT5B	P51692	787 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	FGD1	P98174	961 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	LEXM	Q3ZCV2	418 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TIGD5	Q53EQ6	642 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CEP55	Q53EZ4	464 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	JAKMIP3	Q5VZ66	844 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	C1QTNF1	Q9BXJ1	281 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	BARHL2	Q9NY43	387 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TRPV2	Q9Y5S1	764 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ADGRA3	Q8IWK6	1321 aa		13.27	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	POTEB3	A0JP26	581 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114		M0QZ92	97 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	BACH1	O14867	736 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ADAMTS3	O15072	1205 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	GRM6	O15303	877 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PPFIA3	O75145	1194 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CDC45	O75419	566 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	NFASC	O94856	1347 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	FOS	P01100	380 aa	Predicted RBP	13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	LINC00271	P0C7V0	271 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ADD1	P35611	737 aa	Known RBP	13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	BMPR1A	P36894	532 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	APOBR	Q0VD83	1088 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	COL4A6	Q14031	1691 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	BTG3	Q14201	252 aa	Predicted RBP	13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	RALGAPA2	Q2PPJ7	1873 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PAN2	Q504Q3	1202 aa	Known RBP	13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	IER5	Q5VY09	327 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PPP1R18	Q6NYC8	613 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	POTEB	Q6S5H4	581 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PPP1R16B	Q96T49	567 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	NSUN3	Q9H649	340 aa	Known RBP	13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CLDND1	Q9NY35	253 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	GINS2	Q9Y248	185 aa		13.26	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ATG2A	Q2TAZ0	1938 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	LOXHD1	Q8IVV2	1947 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	MEIS1	O00470	390 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CCNE2	O96020	404 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	SSTR3	P32745	418 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	SREBF1	P36956	1147 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CLK2	P49760	499 aa	Known RBP	13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms