RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 COL20A1Q9P218 1284 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 A0A087WWV3 80 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 CAVIN2O95810 425 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 NLRP12P59046 1061 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 TLE2Q04725 743 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 KCNA10Q16322 511 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 PDXDC2PQ6P474 469 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 SH3RF1Q7Z6J0 888 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 PLA2G4DQ86XP0 818 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 ETNPPLQ8TBG4 499 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 MORC4Q8TE76 937 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 SNX29Q8TEQ0 813 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 ANP32BQ92688 251 aaKnown RBP14.1□□□□□ -0.15
SRSF1-204ENST00000581979 SMARCE1Q969G3 411 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 LENG9Q96B70 501 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 CDK5RAP3Q96JB5 506 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 PCDHA5Q9Y5H7 936 aa14.1□□□□□ -0.15
SRSF1-204ENST00000581979 LCTP09848 1927 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 MYADML2A6NDP7 307 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 MSH4O15457 936 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 SMC2O95347 1197 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 BAATQ14032 418 aaPredicted RBP14.09□□□□□ -0.15
SRSF1-204ENST00000581979 UVSSAQ2YD98 709 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 ISM2Q6H9L7 571 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 ANKRD33Q7Z3H0 272 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 PCSK9Q8NBP7 692 aaKnown RBP14.09□□□□□ -0.15
SRSF1-204ENST00000581979 CYP2W1Q8TAV3 490 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 FAM20AQ96MK3 541 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 TOX2Q96NM4 488 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 TAAR1Q96RJ0 339 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 SPC25Q9HBM1 224 aa14.09□□□□□ -0.15
SRSF1-204ENST00000581979 IGLV3-22A0A075B6J6 115 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 LOC102724159A0A0B4J2E5 919 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 TRIM43BA6NCK2 446 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 C6orf222P0C671 652 aaPredicted RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 PLCG1P19174 1290 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 EIF2AK2P19525 551 aaKnown RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 ZNF165P49910 485 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 SETQ01105 290 aaPredicted RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 PWP2Q15269 919 aaKnown RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 CEP55Q53EZ4 464 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 ARHGEF16Q5VV41 709 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 C11orf57Q6ZUT1 292 aaPredicted RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 STAMQ92783 540 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 TRIM43Q96BQ3 446 aaPredicted RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 ZFP91Q96JP5 570 aaPredicted RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 MMTAG2Q9BU76 263 aaKnown RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 NAT10Q9H0A0 1025 aaKnown RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 CUEDC2Q9H467 287 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 CBX8Q9HC52 389 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 PRDM5Q9NQX1 630 aaPredicted RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 STARD7Q9NQZ5 370 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 GNEQ9Y223 722 aaKnown RBP14.08□□□□□ -0.16
SRSF1-204ENST00000581979 LRRC37A2A6NM11 1700 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 FRMPD4Q14CM0 1322 aa14.08□□□□□ -0.16
SRSF1-204ENST00000581979 CLTBP09497 229 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 TNFAIP2Q03169 654 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 PCNX4Q63HM2 1172 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 RMDN3Q96TC7 470 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 MXRA8Q9BRK3 442 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 MAF1Q9H063 256 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 MAGEF1Q9HAY2 307 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 ADD3Q9UEY8 706 aaKnown RBP14.07□□□□□ -0.16
SRSF1-204ENST00000581979 MAN1B1Q9UKM7 699 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 LAMA2P24043 3122 aaKnown RBP14.07□□□□□ -0.16
SRSF1-204ENST00000581979 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.07□□□□□ -0.16
SRSF1-204ENST00000581979 KIAA0355O15063 1070 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
SRSF1-204ENST00000581979 ASGR1P07306 291 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 MYCLP12524 364 aaPredicted RBP14.07□□□□□ -0.16
SRSF1-204ENST00000581979 IRX5P78411 483 aaPredicted RBP14.07□□□□□ -0.16
SRSF1-204ENST00000581979 PGM5Q15124 567 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 DPCR1Q3MIW9 517 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 NAALADL2Q58DX5 795 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 GNASQ5JWF2 1037 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 NT5DC1Q5TFE4 455 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 NCAPH2Q6IBW4 605 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 TAPT1Q6NXT6 567 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 ERMNQ8TAM6 284 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 BADQ92934 168 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 GLT1D1Q96MS3 346 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 PURBQ96QR8 312 aaKnown RBP14.07□□□□□ -0.16
SRSF1-204ENST00000581979 BLZF1Q9H2G9 400 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 VTA1Q9NP79 307 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 PXMP2Q9NR77 195 aa14.07□□□□□ -0.16
SRSF1-204ENST00000581979 KDM3AQ9Y4C1 1321 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 MEIS1O00470 390 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 PQBP1O60828 265 aaKnown RBP14.06□□□□□ -0.16
SRSF1-204ENST00000581979 CASP1P29466 404 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 CCT6AP40227 531 aaKnown RBP14.06□□□□□ -0.16
SRSF1-204ENST00000581979 SARSP49591 514 aaKnown RBP14.06□□□□□ -0.16
SRSF1-204ENST00000581979 CDK7P50613 346 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 ALDH5A1P51649 535 aaPredicted RBP14.06□□□□□ -0.16
SRSF1-204ENST00000581979 DPYDQ12882 1025 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 GRB10Q13322 594 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 HAUS3Q68CZ6 603 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 IQSEC1Q6DN90 963 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 LUZP1Q86V48 1076 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 TRIML1Q8N9V2 468 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 IL31RAQ8NI17 732 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms