RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 KIZQ2M2Z5 673 aa5.84□□□□□ -1.47
SMCHD1-206ENST00000581631 CACTINQ8WUQ7 758 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-206ENST00000581631 DCAF4Q8WV16 495 aa5.84□□□□□ -1.47
SMCHD1-206ENST00000581631 ZFYVE21Q9BQ24 234 aa5.84□□□□□ -1.47
SMCHD1-206ENST00000581631 UNCXA6NJT0 531 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 CUTAO60888 179 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 FGRP09769 529 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 GNAT1P11488 350 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 CR2P20023 1033 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 ACO1P21399 889 aaKnown RBP5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 RAC3P60763 192 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 DPTQ07507 201 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 NFYCQ13952 458 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 POLNQ7Z5Q5 900 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 IL17DQ8TAD2 202 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 CFHR4Q92496 578 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 IKZF4Q9H2S9 585 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 ARHGEF4Q9NR80 690 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 C11orf21Q9P2W6 132 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 DSEQ9UL01 958 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 PCSK5Q92824 1860 aa5.83□□□□□ -1.48
SMCHD1-206ENST00000581631 WDR33Q9C0J8 1336 aaKnown RBP5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 ZBTB7CA1YPR0 619 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 SSBP05455 408 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 C1SP09871 688 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 ETV4P43268 484 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 INHBEP58166 350 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 GPR85P60893 370 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 SPIRE1Q08AE8 756 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 DBPQ10586 325 aaPredicted RBP5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 TBR1Q16650 682 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 STYK1Q6J9G0 422 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 OSBP2Q969R2 916 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 ZNF408Q9H9D4 720 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 CAPN10Q9HC96 672 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 SLC39A2Q9NP94 309 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 NUB1Q9Y5A7 615 aa5.82□□□□□ -1.48
SMCHD1-206ENST00000581631 AGRPO00253 132 aa5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 SOD2P04179 222 aa5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 FGFR1P11362 822 aa5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 TGM1P22735 817 aa5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 LSM12Q3MHD2 195 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 FNDC7Q5VTL7 733 aa5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 CELF2-AS1Q8N7Q2 184 aa5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 SGSM3Q96HU1 749 aa5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 KCNJ15Q99712 375 aa5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 DPYSL5Q9BPU6 564 aa5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 TRIM8Q9BZR9 551 aa5.81□□□□□ -1.48
SMCHD1-206ENST00000581631 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 ACRV1P26436 265 aa5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 HSP90AA2PQ14568 343 aaPredicted RBP5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 NOLC1Q14978 699 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 ZMAT1Q5H9K5 638 aa5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 PCSK4Q6UW60 755 aa5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 ZNF575Q86XF7 245 aa5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 CEP89Q96ST8 783 aa5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 AARSD1Q9BTE6 412 aaKnown RBP5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 PLA2G12BQ9BX93 195 aa5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 CD244Q9BZW8 370 aa5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 ZDHHC5Q9C0B5 715 aa5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 IPPKQ9H8X2 491 aa5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 ASXL2Q76L83 1435 aa5.8□□□□□ -1.48
SMCHD1-206ENST00000581631 ESYT3A0FGR9 886 aa5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 FAM90A27PA6NNH2 459 aa5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 U2SURPO15042 1029 aaKnown RBP5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 MCM7P33993 719 aa5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 RRADP55042 308 aa5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 ZNF568Q3ZCX4 644 aa5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 LARP4Q71RC2 724 aaKnown RBP eCLIP5.79□□□□□ -1.481e-7■■■□□ 15.8
SMCHD1-206ENST00000581631 LDLRAD3Q86YD5 345 aa5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 IFNL3Q8IZI9 196 aa5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 ZNF808Q8N4W9 903 aaPredicted RBP5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 SCYL1Q96KG9 808 aa5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 MSL2Q9HCI7 577 aa5.79□□□□□ -1.48
SMCHD1-206ENST00000581631 FAM47E-STBD1D6RA91 191 aa5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 WNT9AO14904 365 aa5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 PRODHO43272 600 aa5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 PABPC1P11940 636 aaKnown RBP5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 IL13RA1P78552 427 aa5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 FOXL1Q12952 345 aa5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 STILQ15468 1287 aa5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 DDR2Q16832 855 aa5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 C1orf210Q8IVY1 113 aa5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 CSRNP2Q9H175 543 aa5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 ZNF703Q9H7S9 590 aaPredicted RBP5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 SRPK3Q9UPE1 567 aa5.78□□□□□ -1.48
SMCHD1-206ENST00000581631 BLACEA4D250 179 aa5.77□□□□□ -1.49
SMCHD1-206ENST00000581631 ARHGAP6O43182 974 aa5.77□□□□□ -1.49
SMCHD1-206ENST00000581631 CDC14BO60729 498 aa5.77□□□□□ -1.49
SMCHD1-206ENST00000581631 DPP8Q6V1X1 898 aaPredicted RBP5.77□□□□□ -1.49
SMCHD1-206ENST00000581631 MCF2L2Q86YR7 1114 aa5.77□□□□□ -1.49
SMCHD1-206ENST00000581631 HNRNPLLQ8WVV9 542 aaKnown RBP5.77□□□□□ -1.49
SMCHD1-206ENST00000581631 FAM89AQ96GI7 184 aa5.77□□□□□ -1.49
SMCHD1-206ENST00000581631 OR14A2Q96R54 314 aa5.77□□□□□ -1.49
SMCHD1-206ENST00000581631 NR2E1Q9Y466 385 aa5.77□□□□□ -1.49
SMCHD1-206ENST00000581631 PTPN1P18031 435 aaKnown RBP5.76□□□□□ -1.49
SMCHD1-206ENST00000581631 INHBCP55103 352 aa5.76□□□□□ -1.49
SMCHD1-206ENST00000581631 EIF4HQ15056 248 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms