RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 COL9A2Q14055 689 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 ANGPT1Q15389 498 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 DUSP6Q16828 381 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 HSDL1Q3SXM5 330 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 NAALADL2Q58DX5 795 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 FAM26DQ5JW98 314 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 ZSCAN25Q6NSZ9 544 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 IFNL3Q8IZI9 196 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 LINC01599Q8WXQ3 324 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 APOL5Q9BWW9 433 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 BCL11AQ9H165 835 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 RNPEPQ9H4A4 650 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 TLE6Q9H808 572 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 EHMT1Q9H9B1 1298 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 RALYQ9UKM9 306 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 FNDC1Q4ZHG4 1894 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 B4DLN1 442 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 C2CD4DB7Z1M9 353 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 GPAA1O43292 621 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 SORBS3O60504 671 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 PPFIA4O75335 1185 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 LMNAP02545 664 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 CHRNA1P02708 482 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 SMIM10L2AP0DMW4 78 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 SMIM10L2BP0DMW5 78 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 MRPL12P52815 198 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 STXBP2Q15833 593 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 ST3GAL2Q16842 350 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 HSP90AB4PQ58FF6 505 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 MYSM1Q5VVJ2 828 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 ZKSCAN2Q63HK3 967 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 ANKRD54Q6NXT1 300 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 TMEM184AQ6ZMB5 413 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 CCDC105Q8IYK2 499 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 RGS22Q8NE09 1264 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 OXER1Q8TDS5 423 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 SYTL5Q8TDW5 730 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 KIF1BPQ96EK5 621 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 NEK1Q96PY6 1258 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 SUPT16HQ9Y5B9 1047 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 SPTBN2O15020 2390 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 LOXHD1Q8IVV2 1947 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 SETXQ7Z333 2677 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 WDR19Q8NEZ3 1342 aa9.03□□□□□ -0.96
SMARCE1-217ENST00000580654 PATL2C9JE40 543 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 ASGR2P07307 311 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 GHRP10912 638 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 AOC1P19801 751 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 ERVFC1P60507 584 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 ADAM17P78536 824 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 SP2Q02086 613 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 PPARAQ07869 468 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 MGAT3Q09327 533 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 LPIN1Q14693 890 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 RTN4RL1Q86UN2 441 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 ITPRIPQ8IWB1 547 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 CMTR2Q8IYT2 770 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 DCLK2Q8N568 766 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 ANKK1Q8NFD2 765 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 NSUN6Q8TEA1 469 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 APPBP2Q92624 585 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 POMKQ9H5K3 350 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 BCAS3Q9H6U6 928 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 MRVI1Q9Y6F6 885 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 DENND4AQ7Z401 1863 aa9.02□□□□□ -0.97
SMARCE1-217ENST00000580654 MYH6P13533 1939 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 TSPY2A6NKD2 308 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 H3BRB1 525 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 FSCN2O14926 492 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 EIF3JO75822 258 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 APPP05067 770 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 EIF2AK2P19525 551 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 TECP42680 631 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 GATMP50440 423 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 ACAP1Q15027 740 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 RSPO4Q2I0M5 234 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 OTOGLQ3ZCN5 2332 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 USH1GQ495M9 461 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 PAN2Q504Q3 1202 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 CELF3Q5SZQ8 465 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 NYAP1Q6ZVC0 841 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 DTWD2Q8NBA8 298 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 FLCNQ8NFG4 579 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 KCNG4Q8TDN1 519 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 GPKOWQ92917 476 aaPredicted RBP eCLIP9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 SPATA33Q96N06 139 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 IWS1Q96ST2 819 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 RMDN3Q96TC7 470 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 SEC62Q99442 399 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 TMEM47Q9BQJ4 181 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 MFSD1Q9H3U5 465 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 TUT1Q9H6E5 874 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 TSHZ2Q9NRE2 1034 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 SETD4Q9NVD3 440 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 R4GN57 208 aa9.01□□□□□ -0.97
SMARCE1-217ENST00000580654 FOXP2O15409 715 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 RNF113AO15541 343 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms