RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MTFR1Q15390 333 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 IL17AQ16552 155 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 GJC2Q5T442 439 aaPredicted RBP16.02■□□□□ 0.16
SKA2-205ENST00000580541 LHX8Q68G74 356 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 SWSAP1Q6NVH7 229 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 TMEM87AQ8NBN3 555 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 SNX29Q8TEQ0 813 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 CCDC34Q96HJ3 373 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 CLIC6Q96NY7 704 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 EIF2AK1Q9BQI3 630 aaKnown RBP16.02■□□□□ 0.16
SKA2-205ENST00000580541 CCSER1Q9C0I3 900 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 GDPD2Q9HCC8 539 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 NRBP2Q9NSY0 501 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 ERAP1Q9NZ08 941 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 MYH9P35579 1960 aaKnown RBP16.01■□□□□ 0.15
SKA2-205ENST00000580541 IGKV6D-21A0A0A0MT36 114 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 MOXD2PA6NHM9 499 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 EML1O00423 815 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 ADCY6O43306 1168 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 LGR5O75473 907 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 SGPL1O95470 568 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 PGK1P00558 417 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 MYCP01106 439 aaPredicted RBP16.01■□□□□ 0.15
SKA2-205ENST00000580541 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
SKA2-205ENST00000580541 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.15
SKA2-205ENST00000580541 HOXD8P13378 290 aaPredicted RBP16.01■□□□□ 0.15
SKA2-205ENST00000580541 TMEM63BQ5T3F8 832 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 PDXDC2PQ6P474 469 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 CABP7Q86V35 215 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 TPH2Q8IWU9 490 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 CKAP2LQ8IYA6 745 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 KLHDC9Q8NEP7 349 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 AFAP1L1Q8TED9 768 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 FAM167AQ96KS9 214 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 NACC1Q96RE7 527 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 HSD17B14Q9BPX1 270 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 BCAS3Q9H6U6 928 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 GABBR1Q9UBS5 961 aa16.01■□□□□ 0.15
SKA2-205ENST00000580541 EMSYQ7Z589 1322 aa16■□□□□ 0.15
SKA2-205ENST00000580541 ADAMTS4O75173 837 aa16■□□□□ 0.15
SKA2-205ENST00000580541 PRPF40AO75400 957 aaKnown RBP16■□□□□ 0.15
SKA2-205ENST00000580541 SLITRK3O94933 977 aa16■□□□□ 0.15
SKA2-205ENST00000580541 MYL3P08590 195 aa16■□□□□ 0.15
SKA2-205ENST00000580541 UBE2HP62256 183 aa16■□□□□ 0.15
SKA2-205ENST00000580541 LRRC41Q15345 812 aa16■□□□□ 0.15
SKA2-205ENST00000580541 AXDND1Q5T1B0 1012 aaPredicted RBP16■□□□□ 0.15
SKA2-205ENST00000580541 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
SKA2-205ENST00000580541 CCDC73Q6ZRK6 1079 aa16■□□□□ 0.15
SKA2-205ENST00000580541 C4orf19Q8IY42 314 aa16■□□□□ 0.15
SKA2-205ENST00000580541 MTG1Q9BT17 334 aaPredicted RBP16■□□□□ 0.15
SKA2-205ENST00000580541 SEZ6LQ9BYH1 1024 aa16■□□□□ 0.15
SKA2-205ENST00000580541 OGDHLQ9ULD0 1010 aa16■□□□□ 0.15
SKA2-205ENST00000580541 DNM3Q9UQ16 869 aa16■□□□□ 0.15
SKA2-205ENST00000580541 MAFBQ9Y5Q3 323 aaPredicted RBP16■□□□□ 0.15
SKA2-205ENST00000580541 H3BRB1 525 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 DNM1LO00429 736 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 LGALS2P05162 132 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 GJA8P48165 433 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 KCNA10Q16322 511 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 RESP18Q5W5W9 173 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 CATSPER3Q86XQ3 398 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 EXOC8Q8IYI6 725 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 ANKLE1Q8NAG6 615 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 U2AF1L4Q8WU68 220 aaKnown RBP15.99■□□□□ 0.15
SKA2-205ENST00000580541 MRPS27Q92552 414 aaKnown RBP15.99■□□□□ 0.15
SKA2-205ENST00000580541 SYMPKQ92797 1274 aaKnown RBP15.99■□□□□ 0.15
SKA2-205ENST00000580541 VTI1AQ96AJ9 217 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 LENG1Q96BZ8 264 aaPredicted RBP15.99■□□□□ 0.15
SKA2-205ENST00000580541 DYDC2Q96IM9 177 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 CHAMP1Q96JM3 812 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 CCDC43Q96MW1 224 aaKnown RBP15.99■□□□□ 0.15
SKA2-205ENST00000580541 TUT1Q9H6E5 874 aaKnown RBP15.99■□□□□ 0.15
SKA2-205ENST00000580541 USP25Q9UHP3 1055 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 DOCK5Q9H7D0 1870 aa15.99■□□□□ 0.15
SKA2-205ENST00000580541 DDX11L8A8MPP1 907 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 LYPLA2O95372 231 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 BEX3Q00994 111 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 CYP4A11Q02928 519 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 ZRSR1Q15695 479 aaKnown RBP15.98■□□□□ 0.15
SKA2-205ENST00000580541 XKR3Q5GH77 459 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 SPECC1Q5M775 1068 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 HYIQ5T013 277 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 RRAGBQ5VZM2 374 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 IQUBQ8NA54 791 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 BANK1Q8NDB2 785 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 BBXQ8WY36 941 aaPredicted RBP15.98■□□□□ 0.15
SKA2-205ENST00000580541 EPSTI1Q96J88 318 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 GLT1D1Q96MS3 346 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 LXNQ9BS40 222 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 CRISPLD2Q9H0B8 497 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 CUEDC2Q9H467 287 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 RGL1Q9NZL6 768 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 KCNH3Q9ULD8 1083 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 PPME1Q9Y570 386 aa15.98■□□□□ 0.15
SKA2-205ENST00000580541 CTAGE5O15320 804 aa15.97■□□□□ 0.15
SKA2-205ENST00000580541 HBP1O60381 514 aa15.97■□□□□ 0.15
SKA2-205ENST00000580541 ASGR1P07306 291 aa15.97■□□□□ 0.15
SKA2-205ENST00000580541 SPATA31C1P0DKV0 1188 aa15.97■□□□□ 0.15
SKA2-205ENST00000580541 GNAT1P11488 350 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms