RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 PCDHA4Q9UN74 947 aa22.85■■□□□ 1.25
SMG8-204ENST00000580498 USP11P51784 963 aa22.84■■□□□ 1.25
SMG8-204ENST00000580498 IGBP1P78318 339 aa22.84■■□□□ 1.25
SMG8-204ENST00000580498 KRT76Q01546 638 aa22.84■■□□□ 1.25
SMG8-204ENST00000580498 PRR16Q569H4 304 aa22.84■■□□□ 1.25
SMG8-204ENST00000580498 SMAP1Q8IYB5 467 aaPredicted RBP22.84■■□□□ 1.25
SMG8-204ENST00000580498 VWCEQ96DN2 955 aa22.84■■□□□ 1.25
SMG8-204ENST00000580498 YBX2Q9Y2T7 364 aaKnown RBP22.84■■□□□ 1.25
SMG8-204ENST00000580498 TET1Q8NFU7 2136 aa22.84■■□□□ 1.25
SMG8-204ENST00000580498 LAMA2P24043 3122 aaKnown RBP22.83■■□□□ 1.25
SMG8-204ENST00000580498 FAM86B1E9PN63 330 aa22.83■■□□□ 1.25
SMG8-204ENST00000580498 FAM86B2P0C5J1 330 aa22.83■■□□□ 1.25
SMG8-204ENST00000580498 ITGB3BPQ13352 177 aaPredicted RBP22.83■■□□□ 1.25
SMG8-204ENST00000580498 HIC1Q14526 733 aa22.83■■□□□ 1.25
SMG8-204ENST00000580498 ZNF746Q6NUN9 644 aaPredicted RBP22.83■■□□□ 1.25
SMG8-204ENST00000580498 RPAINQ86UA6 219 aa22.83■■□□□ 1.25
SMG8-204ENST00000580498 CKAP2LQ8IYA6 745 aa22.83■■□□□ 1.25
SMG8-204ENST00000580498 WNT8BQ93098 351 aa22.83■■□□□ 1.25
SMG8-204ENST00000580498 LARP6Q9BRS8 491 aaKnown RBP22.83■■□□□ 1.25
SMG8-204ENST00000580498 PRDM12Q9H4Q4 367 aa22.83■■□□□ 1.25
SMG8-204ENST00000580498 ZNF302Q9NR11 478 aa22.83■■□□□ 1.25
SMG8-204ENST00000580498 SAMM50Q9Y512 469 aa22.83■■□□□ 1.25
SMG8-204ENST00000580498 MYO9BQ13459 2157 aa22.83■■□□□ 1.24
SMG8-204ENST00000580498 POTEB3A0JP26 581 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 CA3P07451 260 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 PSAPP07602 524 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 CIITAP33076 1130 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 IER5Q5VY09 327 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 PDXDC2PQ6P474 469 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 POTEBQ6S5H4 581 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 BLIDQ8IZY5 108 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 DBF4BQ8NFT6 615 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 RASGRP4Q8TDF6 673 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 TELO2Q9Y4R8 837 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 STK36Q9NRP7 1315 aa22.82■■□□□ 1.24
SMG8-204ENST00000580498 GTPBP6O43824 516 aaPredicted RBP22.81■■□□□ 1.24
SMG8-204ENST00000580498 HBP1O60381 514 aa22.81■■□□□ 1.24
SMG8-204ENST00000580498 PFKFB2O60825 505 aa22.81■■□□□ 1.24
SMG8-204ENST00000580498 INSRRP14616 1297 aa22.81■■□□□ 1.24
SMG8-204ENST00000580498 IGFBP4P22692 258 aa22.81■■□□□ 1.24
SMG8-204ENST00000580498 ADAM17P78536 824 aa22.81■■□□□ 1.24
SMG8-204ENST00000580498 PLEKHG4Q58EX7 1191 aa22.81■■□□□ 1.24
SMG8-204ENST00000580498 KRT25Q7Z3Z0 450 aa22.81■■□□□ 1.24
SMG8-204ENST00000580498 BRMS1Q9HCU9 246 aa22.81■■□□□ 1.24
SMG8-204ENST00000580498 IGLV3-22A0A075B6J6 115 aa22.8■■□□□ 1.24
SMG8-204ENST00000580498 MBLAC1A4D2B0 266 aaPredicted RBP22.8■■□□□ 1.24
SMG8-204ENST00000580498 ATG7O95352 703 aa22.8■■□□□ 1.24
SMG8-204ENST00000580498 SCRN1Q12765 414 aa22.8■■□□□ 1.24
SMG8-204ENST00000580498 FAM26DQ5JW98 314 aa22.8■■□□□ 1.24
SMG8-204ENST00000580498 TRAF7Q6Q0C0 670 aa22.8■■□□□ 1.24
SMG8-204ENST00000580498 DAGLBQ8NCG7 672 aa22.8■■□□□ 1.24
SMG8-204ENST00000580498 CRYGNQ8WXF5 182 aa22.8■■□□□ 1.24
SMG8-204ENST00000580498 RAD9AQ99638 391 aa22.8■■□□□ 1.24
SMG8-204ENST00000580498 IFIH1Q9BYX4 1025 aaKnown RBP22.8■■□□□ 1.24
SMG8-204ENST00000580498 TSPYL2Q9H2G4 693 aaPredicted RBP22.8■■□□□ 1.24
SMG8-204ENST00000580498 CEP131Q9UPN4 1083 aa22.8■■□□□ 1.24
SMG8-204ENST00000580498 PCDHA10Q9Y5I2 948 aa22.8■■□□□ 1.24
SMG8-204ENST00000580498 COL1A2P08123 1366 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 CCDC194A0A1B0GVG4 234 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 WDR64B1ANS9 1081 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 GAS7O60861 476 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 MYOGP15173 224 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 AK2P54819 239 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 GPNMBQ14956 572 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 PLCB4Q15147 1175 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 NONOQ15233 471 aaKnown RBP eCLIP22.79■■□□□ 1.24
SMG8-204ENST00000580498 ABHD15Q6UXT9 468 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.79■■□□□ 1.24
SMG8-204ENST00000580498 MYOCDQ8IZQ8 938 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 TBCKQ8TEA7 893 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 ATP8B4Q8TF62 1192 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 DNAJB3Q8WWF6 145 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 FAM167AQ96KS9 214 aa22.79■■□□□ 1.24
SMG8-204ENST00000580498 NAP1L4Q99733 375 aaKnown RBP22.79■■□□□ 1.24
SMG8-204ENST00000580498 MYH9P35579 1960 aaKnown RBP22.78■■□□□ 1.24
SMG8-204ENST00000580498 GJB5O95377 273 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 SFNP31947 248 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 NEK4P51957 841 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 MBTPS1Q14703 1052 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 ZNF484Q5JVG2 852 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 SWSAP1Q6NVH7 229 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 NME8Q8N427 588 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 USP38Q8NB14 1042 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 PCYT2Q99447 389 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 RIT2Q99578 217 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 TEKT3Q9BXF9 490 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 FAM49AQ9H0Q0 323 aaPredicted RBP22.78■■□□□ 1.24
SMG8-204ENST00000580498 TPCN1Q9ULQ1 816 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 INSL6Q9Y581 213 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 PCDHA2Q9Y5H9 948 aa22.78■■□□□ 1.24
SMG8-204ENST00000580498 IGKV6D-21A0A0A0MT36 114 aa22.77■■□□□ 1.24
SMG8-204ENST00000580498 CCNE2O96020 404 aa22.77■■□□□ 1.24
SMG8-204ENST00000580498 JAK3P52333 1124 aa22.77■■□□□ 1.24
SMG8-204ENST00000580498 DEFB103AP81534 67 aa22.77■■□□□ 1.24
SMG8-204ENST00000580498 MRPS6P82932 125 aaKnown RBP22.77■■□□□ 1.24
SMG8-204ENST00000580498 TRIM29Q14134 588 aa22.77■■□□□ 1.24
SMG8-204ENST00000580498 ODR4Q5SWX8 454 aa22.77■■□□□ 1.24
SMG8-204ENST00000580498 LRCH2Q5VUJ6 765 aa22.77■■□□□ 1.24
SMG8-204ENST00000580498 RUFY4Q6ZNE9 571 aa22.77■■□□□ 1.24
SMG8-204ENST00000580498 BBXQ8WY36 941 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms