RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SP2Q02086 613 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 RGMBQ6NW40 437 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SEPT14Q6ZU15 432 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SV2BQ7L1I2 683 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 VSTM4Q8IW00 320 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 CPA4Q9UI42 421 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SAMM50Q9Y512 469 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 KLRC4O43908 158 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ERCC5P28715 1186 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ASIC1P78348 528 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SETQ01105 290 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 KMT5BQ4FZB7 885 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 TEX2Q8IWB9 1127 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 GPRC5AQ8NFJ5 357 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 HSD17B14Q9BPX1 270 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PYM1Q9BRP8 204 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PNMA3Q9UL41 463 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 FANCGO15287 622 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 FCER1AP12319 257 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 IDEP14735 1019 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 RPA1P27694 616 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ALDH5A1P51649 535 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 TMEM63BQ5T3F8 832 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ANKRD23Q86SG2 305 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 DDX12PQ92771 950 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 MMP19Q99542 508 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 TEKT3Q9BXF9 490 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 FBXO40Q9UH90 709 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 TMEM150BA6NC51 233 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 CCNE2O96020 404 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PLA2G4BP0C869 781 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PPP2R5CQ13362 524 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SAMD3Q8N6K7 520 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 FAM133AQ8N9E0 248 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 FGD4Q96M96 766 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 INPP4AQ96PE3 977 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PRDM16Q9HAZ2 1276 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 OGFRQ9NZT2 677 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SLC25A27O95847 323 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 BCRP11274 1271 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ZNF18P17022 549 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ADKP55263 362 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 KCTD2Q14681 263 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SYCP1Q15431 976 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SPATA1Q5VX52 437 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 B3GNT9Q6UX72 402 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 GLIS3Q8NEA6 775 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 EEF2KMTQ96G04 330 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 BHMT2Q9H2M3 363 aa14.1□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ELF2Q15723 593 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ERMNQ8TAM6 284 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PAXBP1Q9Y5B6 917 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PFASO15067 1338 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PPP1R3GB7ZBB8 358 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 STK4Q13043 487 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 STXBP2Q15833 593 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ARSHQ5FYA8 562 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 HYIQ5T013 277 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 HAUS3Q68CZ6 603 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 CYP4F22Q6NT55 531 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 RIT2Q99578 217 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 TBC1D7Q9P0N9 293 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 STK17AQ9UEE5 414 aa14.09□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PDE4DQ08499 809 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 UGCGQ16739 394 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 MIER3Q7Z3K6 550 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 C7orf25Q9BPX7 421 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 LXNQ9BS40 222 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 NT5C3AQ9H0P0 336 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CUEDC2Q9H467 287 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SLC39A2Q9NP94 309 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 KCNA2P16389 499 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 PRCPP42785 496 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SPECC1LQ69YQ0 1117 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CYFIP1Q7L576 1253 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 NIPA1Q7RTP0 329 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 GPBP1Q86WP2 473 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ZHX3Q9H4I2 956 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 DNM3Q9UQ16 869 aa14.08□□□□□ -0.16
CDK5RAP3-217ENST00000580287 KDM3AQ9Y4C1 1321 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SFI1A8K8P3 1242 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 FAM155AB1AL88 458 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CYP11B2P19099 503 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ADORA2AP29274 412 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SLC12A3P55017 1021 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 NLRX1Q86UT6 975 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 DNERQ8NFT8 737 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 KIF18AQ8NI77 898 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CPLX3Q8WVH0 158 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 FGFBP2Q9BYJ0 223 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 MROH8Q9H579 483 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 RMND1Q9NWS8 449 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TLL2Q9Y6L7 1015 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 DNAJC25-GNG10A0A024R161 153 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TEX33O43247 280 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 EIF3JO75822 258 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 LRRC41Q15345 812 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TAF1CQ15572 869 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 LY6KQ17RY6 165 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms