RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 EPHB1P54762 984 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 SETQ01105 290 aaPredicted RBP4.04□□□□□ -1.76
KPNB1-208ENST00000580019 SQSTM1Q13501 440 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 SAFB2Q14151 953 aaKnown RBP eCLIP4.04□□□□□ -1.76
KPNB1-208ENST00000580019 MPP2Q14168 576 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 HLTFQ14527 1009 aaKnown RBP eCLIP4.04□□□□□ -1.76
KPNB1-208ENST00000580019 LONRF3Q496Y0 759 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 MAP9Q49MG5 647 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 C2orf27AQ580R0 203 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 LAIR1Q6GTX8 287 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 CYB5RLQ6IPT4 315 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 TMEM192Q8IY95 271 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 THAP3Q8WTV1 239 aaPredicted RBP4.04□□□□□ -1.76
KPNB1-208ENST00000580019 CRBNQ96SW2 442 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 KRTAP1-5Q9BYS1 174 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.04□□□□□ -1.767e-8■■■□□ 14.8
KPNB1-208ENST00000580019 CROTQ9UKG9 612 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 THRAP3Q9Y2W1 955 aaKnown RBP4.04□□□□□ -1.76
KPNB1-208ENST00000580019 MYO15BQ96JP2 1530 aa4.04□□□□□ -1.76
KPNB1-208ENST00000580019 WDHD1O75717 1129 aaPredicted RBP4.03□□□□□ -1.76
KPNB1-208ENST00000580019 RAD17O75943 681 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 PF4P02776 101 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 ZNF37AP17032 561 aaPredicted RBP4.03□□□□□ -1.76
KPNB1-208ENST00000580019 PAX3P23760 479 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 CD38P28907 300 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 GNALP38405 381 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 IRX6P78412 446 aaPredicted RBP4.03□□□□□ -1.76
KPNB1-208ENST00000580019 FSTL1Q12841 308 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 PPP2R5AQ15172 486 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 ZRSR2Q15696 482 aaKnown RBP4.03□□□□□ -1.76
KPNB1-208ENST00000580019 FXNQ16595 210 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 DDR2Q16832 855 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 CR1LQ2VPA4 569 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 MTERF2Q49AM1 385 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 BRDTQ58F21 947 aaPredicted RBP4.03□□□□□ -1.76
KPNB1-208ENST00000580019 DALRD3Q5D0E6 543 aaKnown RBP4.03□□□□□ -1.76
KPNB1-208ENST00000580019 FBXL19Q6PCT2 694 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 TRMT10BQ6PF06 316 aaKnown RBP4.03□□□□□ -1.76
KPNB1-208ENST00000580019 MAMDC4Q6UXC1 1216 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 POLNQ7Z5Q5 900 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 CHAC2Q8WUX2 184 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 NKD1Q969G9 470 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 SLC6A18Q96N87 628 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 MAF1Q9H063 256 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 ZNF703Q9H7S9 590 aaPredicted RBP4.03□□□□□ -1.76
KPNB1-208ENST00000580019 KCNQ5Q9NR82 932 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 ST7Q9NRC1 585 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 ACTR10Q9NZ32 417 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 GULP1Q9UBP9 304 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 ARHGEF11O15085 1522 aa4.03□□□□□ -1.76
KPNB1-208ENST00000580019 SCRIBQ14160 1630 aa4.03□□□□□ -1.77
KPNB1-208ENST00000580019 ROBO2Q9HCK4 1378 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 SMARCA2P51531 1590 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 MAFGO15525 162 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 GREM1O60565 184 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 ASMTLO95671 621 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 MYL1P05976 194 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 CD3EP07766 207 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 EIF6P56537 245 aaKnown RBP4.02□□□□□ -1.77
KPNB1-208ENST00000580019 APOBRQ0VD83 1088 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 BRD3Q15059 726 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 VPS72Q15906 364 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 NFE2Q16621 373 aaPredicted RBP4.02□□□□□ -1.77
KPNB1-208ENST00000580019 CT47A1Q5JQC4 288 aaPredicted RBP4.02□□□□□ -1.77
KPNB1-208ENST00000580019 NOL9Q5SY16 702 aaKnown RBP4.02□□□□□ -1.77
KPNB1-208ENST00000580019 EEF1DP3Q658K8 133 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 RCSD1Q6JBY9 416 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 NLRC3Q7RTR2 1065 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 SLITRK4Q8IW52 837 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 IFNL2Q8IZJ0 200 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 SAMD3Q8N6K7 520 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 CELF2-AS1Q8N7Q2 184 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 OR6P1Q8NGX9 317 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 TSR2Q969E8 191 aaKnown RBP4.02□□□□□ -1.77
KPNB1-208ENST00000580019 EVI5LQ96CN4 794 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 ATG4CQ96DT6 458 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 SHDQ96IW2 340 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 SCYL1Q96KG9 808 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 AURKAIP1Q9NWT8 199 aaPredicted RBP4.02□□□□□ -1.77
KPNB1-208ENST00000580019 MCM8Q9UJA3 840 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 SF3B6Q9Y3B4 125 aaKnown RBP4.02□□□□□ -1.77
KPNB1-208ENST00000580019 LMTK3Q96Q04 1460 aa4.02□□□□□ -1.77
KPNB1-208ENST00000580019 KDM2BQ8NHM5 1336 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 SHOXO15266 292 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 SGSM2O43147 1006 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 KCNQ2O43526 872 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 TSPAN6O43657 245 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 ALDH1L1O75891 902 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 LMNAP02545 664 aaKnown RBP4.01□□□□□ -1.77
KPNB1-208ENST00000580019 SOX5P35711 763 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 CDKN1CP49918 316 aaPredicted RBP4.01□□□□□ -1.77
KPNB1-208ENST00000580019 EVA1CP58658 441 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 TKFCQ3LXA3 575 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 SNAP47Q5SQN1 464 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 PPP4R4Q6NUP7 873 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 C11orf96Q7Z7L8 435 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 DDX42Q86XP3 938 aaKnown RBP eCLIP4.01□□□□□ -1.77
KPNB1-208ENST00000580019 JMYQ8N9B5 988 aa4.01□□□□□ -1.77
KPNB1-208ENST00000580019 GOLM1Q8NBJ4 401 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms