RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 C16orf72Q14CZ0 275 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 KLC3Q6P597 504 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 LRRC8BQ6P9F7 803 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 DARS2Q6PI48 645 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 TAGAPQ8N103 731 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 EXT2Q93063 718 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 EFHD2Q96C19 240 aaPredicted RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 SEPT9Q9UHD8 586 aaPredicted RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 POLIQ9UNA4 740 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 MCF2LO15068 1137 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 KRT1P04264 644 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 TCP1P17987 556 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 ATP1A2P50993 1020 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 NNTQ13423 1086 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 SKIV2LQ15477 1246 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 SNCBQ16143 134 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 NUGGCQ68CJ6 796 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 DSTYKQ6XUX3 929 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 CCDC80Q76M96 950 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 NANOGNBQ7Z5D8 188 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 ERLEC1Q96DZ1 483 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 EPAS1Q99814 870 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 CAPS2Q9BXY5 557 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 CUEDC2Q9H467 287 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 DNMT1P26358 1616 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 MED7O43513 233 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 KRT8P05787 483 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 PAPOLAP51003 745 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 CAV1Q03135 178 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 NSUN2Q08J23 767 aaKnown RBP eCLIP5.5□□□□□ -1.53
NF1-219ENST00000579081 CUL1Q13616 776 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 RASGRF1Q13972 1273 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 POLA2Q14181 598 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 MESDQ14696 234 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 TMEM259Q4ZIN3 620 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 TCP11X2Q5H9J9 407 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 PCGF5Q86SE9 256 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 C8orf58Q8NAV2 365 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 SLC26A7Q8TE54 656 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 SCG3Q8WXD2 468 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 ABHD8Q96I13 439 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 NCOA5Q9HCD5 579 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 PCDHA12Q9UN75 941 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 FHOD1Q9Y613 1164 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 EIF4G3O43432 1585 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 KCNJ18B7U540 433 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 GOLGA8SH3BPF8 625 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 NEMP1O14524 444 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 E2F6O75461 281 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 TAF5LO75529 589 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 TECP42680 631 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 KCNJ12Q14500 433 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 MTHFSDQ2M296 383 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 ZNF467Q7Z7K2 595 aaPredicted RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 C7orf31Q8N865 590 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 NAF1Q96HR8 494 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 CBX8Q9HC52 389 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 INO80B-WBP1J3KQ70 363 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 RNMTO43148 476 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 NCF2P19878 526 aaPredicted RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 CIITAP33076 1130 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 KIF19Q2TAC6 998 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 ODR4Q5SWX8 454 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 TRIML2Q8N7C3 387 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 GSDMAQ96QA5 445 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 INO80BQ9C086 356 aaPredicted RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 INTS9Q9NV88 658 aaKnown RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 TRPC5Q9UL62 973 aaPredicted RBP5.5□□□□□ -1.53
NF1-219ENST00000579081 RGS12O14924 1447 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 UNC13AQ9UPW8 1703 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 ZNF518AQ6AHZ1 1483 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 PARD3Q8TEW0 1356 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 ADAM9Q13443 819 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 ARMCX2Q7L311 632 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 SPATA5Q8NB90 893 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 BTG4Q9NY30 223 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 VPS54Q9P1Q0 977 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 PDP2Q9P2J9 529 aa5.5□□□□□ -1.53
NF1-219ENST00000579081 FRMPD2Q68DX3 1309 aaPredicted RBP5.49□□□□□ -1.53
NF1-219ENST00000579081 MMEP08473 750 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 CPA1P15085 419 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 GRIN1Q05586 938 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 TMED2Q15363 201 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 NAA35Q5VZE5 725 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 MIS18BP1Q6P0N0 1132 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 CCDC197Q8NCU1 140 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 WDR48Q8TAF3 677 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 TRPC4APQ8TEL6 797 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 DEPDC1BQ8WUY9 529 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 USP6NLQ92738 828 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 EPS8L2Q9H6S3 715 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 STK17AQ9UEE5 414 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 DNAJC12Q9UKB3 198 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 SNX5Q9Y5X3 404 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 SNX2O60749 519 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 SRGAP2CP0DJJ0 459 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 MAPK4P31152 587 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 STK4Q13043 487 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 MORC3Q14149 939 aa5.49□□□□□ -1.53
NF1-219ENST00000579081 CERKLQ49MI3 558 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms