RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 WDR81Q562E7 1941 aa15.6■□□□□ 0.09
CSNK1D-209ENST00000578904 DUSP11O75319 330 aaKnown RBP15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 CCDC192P0DO97 292 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 PTGS1P23219 599 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 RPA1P27694 616 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 SP2Q02086 613 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 EPHA7Q15375 998 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 CAMK4Q16566 473 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 PRPF38BQ5VTL8 546 aaKnown RBP15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 ZNF746Q6NUN9 644 aaPredicted RBP15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 USP49Q70CQ1 688 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 MIER3Q7Z3K6 550 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 DHX37Q8IY37 1157 aaKnown RBP15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 CCDC47Q96A33 483 aaKnown RBP15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 POLR3CQ9BUI4 534 aaPredicted RBP15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 PANK2Q9BZ23 570 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 AP5M1Q9H0R1 490 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 MLXIPQ9HAP2 919 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 SPC25Q9HBM1 224 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 TUFT1Q9NNX1 390 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 SERTAD1Q9UHV2 236 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 SYNRGQ9UMZ2 1314 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 FRMPD3Q5JV73 1810 aa15.59■□□□□ 0.09
CSNK1D-209ENST00000578904 DDX39AO00148 427 aaKnown RBP15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 DYNC1LI2O43237 492 aaPredicted RBP15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 ATP9AO75110 1047 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 SOX10P56693 466 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 ZNF445P59923 1031 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 SP4Q02446 784 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 ARHGAP1Q07960 439 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 ITGB3BPQ13352 177 aaPredicted RBP15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 KARSQ15046 597 aaKnown RBP15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 LONRF3Q496Y0 759 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 CELF3Q5SZQ8 465 aaKnown RBP15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 HYIQ5T013 277 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 METTL7BQ6UX53 244 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 CYFIP1Q7L576 1253 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 SMAP1Q8IYB5 467 aaPredicted RBP15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 TMEM106CQ9BVX2 250 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 VAV3Q9UKW4 847 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 Q9Y3F1 56 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 SAMM50Q9Y512 469 aa15.58■□□□□ 0.08
CSNK1D-209ENST00000578904 SYCE3A1L190 88 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 WDR64B1ANS9 1081 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 FARP2O94887 1054 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 PGK1P00558 417 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 GJB1P08034 283 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 C6orf222P0C671 652 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 PLCG1P19174 1290 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 CDC25AP30304 524 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 GJA9P57773 515 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 SPIRE1Q08AE8 756 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 LAMC2Q13753 1193 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 POSTNQ15063 836 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 LHX8Q68G74 356 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 RBM43Q6ZSC3 357 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 SV2BQ7L1I2 683 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 GJA10Q969M2 543 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 SPATA33Q96N06 139 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 EIF2AK1Q9BQI3 630 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 GTPBP4Q9BZE4 634 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 UPF3AQ9H1J1 476 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 JPH1Q9HDC5 661 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 BMP2KQ9NSY1 1161 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 DNM3Q9UQ16 869 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 DOCK5Q9H7D0 1870 aa15.57■□□□□ 0.08
CSNK1D-209ENST00000578904 PP2D1A8MPX8 630 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 NOP56O00567 594 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 CHMP2AO43633 222 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 ACTN4O43707 911 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 CAVIN2O95810 425 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 P4HBP07237 508 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 CPT1AP50416 773 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 E2F4Q16254 413 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 BRDTQ58F21 947 aaPredicted RBP15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 LRSAM1Q6UWE0 723 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 RNF180Q86T96 592 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 PPTC7Q8NI37 304 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 U2AF1L4Q8WU68 220 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 SMARCE1Q969G3 411 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 EMID1Q96A84 441 aaPredicted RBP15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 MMTAG2Q9BU76 263 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 UNC45AQ9H3U1 944 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 BCAS3Q9H6U6 928 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 KIAA1468Q9P260 1216 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 SLC9A2Q9UBY0 812 aa15.56■□□□□ 0.08
CSNK1D-209ENST00000578904 MYADML2A6NDP7 307 aa15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 DHX15O43143 795 aaKnown RBP15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 GTPBP6O43824 516 aaPredicted RBP15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 ADAMTS4O75173 837 aa15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 TFRCP02786 760 aaKnown RBP15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 PSAPP07602 524 aa15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 MMP3P08254 477 aa15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 BEX3Q00994 111 aa15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 FSCN1Q16658 493 aaKnown RBP15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 TMEM119Q4V9L6 283 aa15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 MIS18BP1Q6P0N0 1132 aa15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 CKAP2LQ8IYA6 745 aa15.55■□□□□ 0.08
CSNK1D-209ENST00000578904 AFG1LQ8WV93 481 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms