RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 ZFYVE21Q9BQ24 234 aa6.76□□□□□ -1.33
PTPRM-207ENST00000578571 MCOLN1Q9GZU1 580 aa6.76□□□□□ -1.33
PTPRM-207ENST00000578571 PPARGC1AQ9UBK2 798 aaKnown RBP6.76□□□□□ -1.33
PTPRM-207ENST00000578571 HCFC2Q9Y5Z7 792 aa6.76□□□□□ -1.33
PTPRM-207ENST00000578571 ANKRD36BQ8N2N9 1353 aa6.76□□□□□ -1.33
PTPRM-207ENST00000578571 C1orf167Q5SNV9 1468 aa6.76□□□□□ -1.33
PTPRM-207ENST00000578571 MST1RQ04912 1400 aa6.76□□□□□ -1.33
PTPRM-207ENST00000578571 WASHC2AQ641Q2 1341 aa6.76□□□□□ -1.33
PTPRM-207ENST00000578571 ZC3H12DA2A288 527 aaKnown RBP6.75□□□□□ -1.33
PTPRM-207ENST00000578571 H7BY64 318 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 PEX10O60683 326 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 NTRK1P04629 796 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 VIPR1P32241 457 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 MAPKAPK2P49137 400 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 NR1I3Q14994 352 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 MAMDC2Q7Z304 686 aaPredicted RBP6.75□□□□□ -1.33
PTPRM-207ENST00000578571 NOP9Q86U38 636 aaKnown RBP6.75□□□□□ -1.33
PTPRM-207ENST00000578571 CABP7Q86V35 215 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 RIOX2Q8IUF8 465 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 POU5F2Q8N7G0 328 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 NETO2Q8NC67 525 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 FBXO15Q8NCQ5 510 aaPredicted RBP6.75□□□□□ -1.33
PTPRM-207ENST00000578571 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.75□□□□□ -1.33
PTPRM-207ENST00000578571 TRMT2BQ96GJ1 504 aaKnown RBP6.75□□□□□ -1.33
PTPRM-207ENST00000578571 TMEM169Q96HH4 297 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 RXFP1Q9HBX9 757 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 TMEM260Q9NX78 707 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 KNSTRNQ9Y448 316 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 MRPL42Q9Y6G3 142 aaKnown RBP6.75□□□□□ -1.33
PTPRM-207ENST00000578571 XIRP1Q702N8 1843 aaKnown RBP6.75□□□□□ -1.33
PTPRM-207ENST00000578571 CGNL1Q0VF96 1302 aa6.75□□□□□ -1.33
PTPRM-207ENST00000578571 TOPAZ1Q8N9V7 1692 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 NSD2O96028 1365 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 KTN1Q86UP2 1357 aaKnown RBP6.74□□□□□ -1.33
PTPRM-207ENST00000578571 CCDC163A0A0D9SF12 145 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 ESYT3A0FGR9 886 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 ABLIM1O14639 778 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 GABREP78334 506 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 TRIM61Q5EBN2 209 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 IFNL3Q8IZI9 196 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 CHAMP1Q96JM3 812 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 CLDND1Q9NY35 253 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 EDC4Q6P2E9 1401 aaKnown RBP6.74□□□□□ -1.33
PTPRM-207ENST00000578571 ACEP12821 1306 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 TTC21AQ8NDW8 1320 aa6.74□□□□□ -1.33
PTPRM-207ENST00000578571 POLR3AO14802 1390 aaPredicted RBP6.73□□□□□ -1.33
PTPRM-207ENST00000578571 F8W031 263 aaPredicted RBP6.73□□□□□ -1.33
PTPRM-207ENST00000578571 FARP2O94887 1054 aaPredicted RBP6.73□□□□□ -1.33
PTPRM-207ENST00000578571 SRSF3P84103 164 aaKnown RBP6.73□□□□□ -1.33
PTPRM-207ENST00000578571 TMEM62Q0P6H9 643 aa6.73□□□□□ -1.33
PTPRM-207ENST00000578571 ZNF648Q5T619 568 aaPredicted RBP6.73□□□□□ -1.33
PTPRM-207ENST00000578571 MROH9Q5TGP6 573 aa6.73□□□□□ -1.33
PTPRM-207ENST00000578571 TMC6Q7Z403 805 aa6.73□□□□□ -1.33
PTPRM-207ENST00000578571 GSTCDQ8NEC7 633 aa6.73□□□□□ -1.33
PTPRM-207ENST00000578571 SLC7A14Q8TBB6 771 aa6.73□□□□□ -1.33
PTPRM-207ENST00000578571 FAM84AQ96KN4 292 aa6.73□□□□□ -1.33
PTPRM-207ENST00000578571 SLC52A2Q9HAB3 445 aa6.73□□□□□ -1.33
PTPRM-207ENST00000578571 NCOA5Q9HCD5 579 aaKnown RBP6.73□□□□□ -1.33
PTPRM-207ENST00000578571 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
PTPRM-207ENST00000578571 SIT1Q9Y3P8 196 aa6.73□□□□□ -1.33
PTPRM-207ENST00000578571 A0A1W2PP64 1363 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 ARHGEF10O15013 1369 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 TEX51A0A1B0GUA7 166 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 AQP7O14520 342 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 KRT1P04264 644 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 PRR5P85299 388 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 DDX10Q13206 875 aaKnown RBP6.72□□□□□ -1.33
PTPRM-207ENST00000578571 KIZQ2M2Z5 673 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 GIMAP6Q6P9H5 292 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 ZC3H14Q6PJT7 736 aaKnown RBP6.72□□□□□ -1.33
PTPRM-207ENST00000578571 BRINP3Q76B58 766 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 JAM3Q9BX67 310 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 MRPL4Q9BYD3 311 aaKnown RBP6.72□□□□□ -1.33
PTPRM-207ENST00000578571 SLC12A5Q9H2X9 1139 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 CNTD2Q9H8S5 307 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 PANK3Q9H999 370 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 GCM1Q9NP62 436 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 NDOR1Q9UHB4 597 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 MBD1Q9UIS9 605 aaPredicted RBP6.72□□□□□ -1.33
PTPRM-207ENST00000578571 USP6P35125 1406 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 USP32Q8NFA0 1604 aa6.72□□□□□ -1.33
PTPRM-207ENST00000578571 MYOM1P52179 1685 aa6.71□□□□□ -1.33
PTPRM-207ENST00000578571 CPSF1Q10570 1443 aaKnown RBP6.71□□□□□ -1.34
PTPRM-207ENST00000578571 NSD3Q9BZ95 1437 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.71□□□□□ -1.34
PTPRM-207ENST00000578571 PPP1R12AO14974 1030 aaPredicted RBP6.71□□□□□ -1.34
PTPRM-207ENST00000578571 ANP32CO43423 234 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 KCNQ2O43526 872 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 SEMA7AO75326 666 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 FBLN1P23142 703 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 GRK2P25098 689 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 GRK3P35626 688 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 SLC6A11P48066 632 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 OLFML2BQ68BL8 750 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 SYDE1Q6ZW31 735 aaPredicted RBP6.71□□□□□ -1.34
PTPRM-207ENST00000578571 KRT28Q7Z3Y7 464 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 DCP2Q8IU60 420 aaKnown RBP6.71□□□□□ -1.34
PTPRM-207ENST00000578571 LRRC59Q96AG4 307 aaKnown RBP6.71□□□□□ -1.34
PTPRM-207ENST00000578571 TSPAN17Q96FV3 270 aa6.71□□□□□ -1.34
PTPRM-207ENST00000578571 PEX11GQ96HA9 241 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms