RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	GHR	P10912	638 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ACTN1	P12814	892 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	INSRR	P14616	1297 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MARK3	P27448	753 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CD52	P31358	61 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MCM5	P33992	734 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	IRS1	P35568	1242 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MRPL12	P52815	198 aa	Known RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ACTR2	P61160	394 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ARHGAP4	P98171	946 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	HYAL1	Q12794	435 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	IKBKE	Q14164	716 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NEDD9	Q14511	834 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	GRIK4	Q16099	956 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	LEXM	Q3ZCV2	418 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	BRDT	Q58F21	947 aa	Predicted RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	BMP2KL	Q5H9B9	411 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TCEAL5	Q5H9L2	206 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	XRRA1	Q6P2D8	792 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KCNV1	Q6PIU1	500 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	B3GNT9	Q6UX72	402 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ABHD15	Q6UXT9	468 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CATIP	Q7Z7H3	387 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ADGRD2	Q7Z7M1	963 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	RALYL	Q86SE5	291 aa	Known RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MICU3	Q86XE3	530 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CCDC60	Q8IWA6	550 aa	Predicted RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	FAM178B	Q8IXR5	827 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KIAA0319L	Q8IZA0	1049 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MYOCD	Q8IZQ8	938 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	VN1R2	Q8NFZ6	395 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	DNAJB3	Q8WWF6	145 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	RUFY2	Q8WXA3	655 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SYMPK	Q92797	1274 aa	Known RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CLP1	Q92989	425 aa	Known RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	RRP36	Q96EU6	259 aa	Known RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TMEM87B	Q96K49	555 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TGS1	Q96RS0	853 aa	Known RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MXRA8	Q9BRK3	442 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	LRFN3	Q9BTN0	628 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KATNAL1	Q9BW62	490 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	USP26	Q9BXU7	913 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	UBE2Z	Q9H832	354 aa	Predicted RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PSTPIP2	Q9H939	334 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MLXIP	Q9HAP2	919 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	AGO4	Q9HCK5	861 aa	Known RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	RIC8A	Q9NPQ8	531 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	LMCD1	Q9NZU5	365 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NOD1	Q9Y239	953 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CDY2A	Q9Y6F7	541 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329		V9GY48	417 aa	Predicted RBP	5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	EMSY	Q7Z589	1322 aa		5.12	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KAT6A	Q92794	2004 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	GRXCR2	A6NFK2	248 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PI4K2B	G5E9Z4	385 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329		H3BQ06	376 aa	Predicted RBP	5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CAND2	O75155	1236 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	DGKI	O75912	1065 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	UPP2	O95045	317 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PARN	O95453	639 aa	Known RBP	5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	HSPA4	P34932	840 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SREBF1	P36956	1147 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KCNJ6	P48051	423 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	EVC	P57679	992 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TMEM62	Q0P6H9	643 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	APOBR	Q0VD83	1088 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TRDN	Q13061	729 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PPFIA1	Q13136	1202 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	DRP2	Q13474	957 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KCNC3	Q14003	757 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TOB2	Q14106	344 aa	Predicted RBP	5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	DSC3	Q14574	896 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	UGCG	Q16739	394 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	LRRC55	Q6ZSA7	311 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	DHX32	Q7L7V1	743 aa	Known RBP	5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TMEM192	Q8IY95	271 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CCDC155	Q8N6L0	562 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	FBXO22	Q8NEZ5	403 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CTCFL	Q8NI51	663 aa	Predicted RBP	5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SMARCC2	Q8TAQ2	1214 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	RASGRP4	Q8TDF6	673 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SEPT1	Q8WYJ6	367 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	HLA-C	Q95604	372 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MRPL38	Q96DV4	380 aa	Known RBP	5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	AIFM3	Q96NN9	605 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MPHOSPH6	Q99547	160 aa	Known RBP	5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ANO3	Q9BYT9	981 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	IFIH1	Q9BYX4	1025 aa	Known RBP	5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ERVK-5	Q9HDB9	667 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ANO2	Q9NQ90	1003 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	BARHL2	Q9NY43	387 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CLEC1B	Q9P126	229 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	INSL6	Q9Y581	213 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SNX14	Q9Y5W7	946 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MRPL42	Q9Y6G3	142 aa	Known RBP	5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NRCAM	Q92823	1304 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	IGSF9B	Q9UPX0	1349 aa		5.11	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KLF18	A0A0U1RQI7	1052 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TMEM150B	A6NC51	233 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329		C9IYK1	514 aa		5.1	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms