RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 CCNE2O96020 404 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 MYOGP15173 224 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 KCNJ6P48051 423 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 STAT5BP51692 787 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 WDR5P61964 334 aaKnown RBP26.11■■□□□ 1.77
VAPA-205ENST00000578314 SETQ01105 290 aaPredicted RBP26.11■■□□□ 1.77
VAPA-205ENST00000578314 SCRN1Q12765 414 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 ANKRD1Q15327 319 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 GRIK4Q16099 956 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 FAM26DQ5JW98 314 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 MARCH8Q5T0T0 291 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 RRN3P2A6NIE6 340 aa26.1■■□□□ 1.77
VAPA-205ENST00000578314 EDIL3O43854 480 aa26.1■■□□□ 1.77
VAPA-205ENST00000578314 EFCAB14O75071 495 aa26.1■■□□□ 1.77
VAPA-205ENST00000578314 CDKL5O76039 1030 aa26.1■■□□□ 1.77
VAPA-205ENST00000578314 IKBKEQ14164 716 aa26.1■■□□□ 1.77
VAPA-205ENST00000578314 TAF2Q6P1X5 1199 aa26.1■■□□□ 1.77
VAPA-205ENST00000578314 ABHD15Q6UXT9 468 aa26.1■■□□□ 1.77
VAPA-205ENST00000578314 TNPO1Q92973 898 aaKnown RBP26.1■■□□□ 1.77
VAPA-205ENST00000578314 SLKQ9H2G2 1235 aaPredicted RBP26.1■■□□□ 1.77
VAPA-205ENST00000578314 TBC1D22BQ9NU19 505 aa26.1■■□□□ 1.77
VAPA-205ENST00000578314 PCDHA4Q9UN74 947 aa26.1■■□□□ 1.77
VAPA-205ENST00000578314 SLC26A2P50443 739 aa26.09■■□□□ 1.77
VAPA-205ENST00000578314 USP11P51784 963 aa26.09■■□□□ 1.77
VAPA-205ENST00000578314 AK2P54819 239 aa26.09■■□□□ 1.77
VAPA-205ENST00000578314 PLEKHG4Q58EX7 1191 aa26.09■■□□□ 1.77
VAPA-205ENST00000578314 RUFY4Q6ZNE9 571 aa26.09■■□□□ 1.77
VAPA-205ENST00000578314 DBF4BQ8NFT6 615 aa26.09■■□□□ 1.77
VAPA-205ENST00000578314 ZNF577Q9BSK1 485 aa26.09■■□□□ 1.77
VAPA-205ENST00000578314 KIF28PB7ZC32 967 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 M0R2N6 131 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 SEC24BO95487 1268 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 INSRRP14616 1297 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 PLCB4Q15147 1175 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 PRR16Q569H4 304 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 GALNT17Q6IS24 598 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 DAGLBQ8NCG7 672 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 LENG9Q96B70 501 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 AIFM3Q96NN9 605 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 GAS2L1Q99501 681 aaPredicted RBP26.08■■□□□ 1.77
VAPA-205ENST00000578314 C22orf23Q9BZE7 217 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 PRDM12Q9H4Q4 367 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 TUBE1Q9UJT0 475 aa26.08■■□□□ 1.77
VAPA-205ENST00000578314 CHD7Q9P2D1 2997 aa26.07■■□□□ 1.76
VAPA-205ENST00000578314 DDX39AO00148 427 aaKnown RBP26.07■■□□□ 1.76
VAPA-205ENST00000578314 CTSHP09668 335 aa26.07■■□□□ 1.76
VAPA-205ENST00000578314 DEFB103AP81534 67 aa26.07■■□□□ 1.76
VAPA-205ENST00000578314 MKRN4PQ13434 485 aaPredicted RBP26.07■■□□□ 1.76
VAPA-205ENST00000578314 NPY5RQ15761 445 aa26.07■■□□□ 1.76
VAPA-205ENST00000578314 PPP2R2DQ66LE6 453 aa26.07■■□□□ 1.76
VAPA-205ENST00000578314 BLIDQ8IZY5 108 aa26.07■■□□□ 1.76
VAPA-205ENST00000578314 COL25A1Q9BXS0 654 aaPredicted RBP26.07■■□□□ 1.76
VAPA-205ENST00000578314 CA3P07451 260 aa26.06■■□□□ 1.76
VAPA-205ENST00000578314 ZNF746Q6NUN9 644 aaPredicted RBP26.06■■□□□ 1.76
VAPA-205ENST00000578314 RSPH3Q86UC2 560 aa26.06■■□□□ 1.76
VAPA-205ENST00000578314 OSBPL7Q9BZF2 842 aa26.06■■□□□ 1.76
VAPA-205ENST00000578314 TRPC6Q9Y210 931 aa26.06■■□□□ 1.76
VAPA-205ENST00000578314 STK36Q9NRP7 1315 aa26.06■■□□□ 1.76
VAPA-205ENST00000578314 POTEB3A0JP26 581 aa26.05■■□□□ 1.76
VAPA-205ENST00000578314 RBAK-RBAKDNI3L0D1 243 aa26.05■■□□□ 1.76
VAPA-205ENST00000578314 CHRNA1P02708 482 aa26.05■■□□□ 1.76
VAPA-205ENST00000578314 FAM160B1Q5W0V3 765 aa26.05■■□□□ 1.76
VAPA-205ENST00000578314 MIS18BP1Q6P0N0 1132 aa26.05■■□□□ 1.76
VAPA-205ENST00000578314 POTEBQ6S5H4 581 aa26.05■■□□□ 1.76
VAPA-205ENST00000578314 TBCKQ8TEA7 893 aa26.05■■□□□ 1.76
VAPA-205ENST00000578314 SEPT8Q92599 483 aa26.05■■□□□ 1.76
VAPA-205ENST00000578314 UIMC1Q96RL1 719 aa26.05■■□□□ 1.76
VAPA-205ENST00000578314 BACH1O14867 736 aa26.04■■□□□ 1.76
VAPA-205ENST00000578314 TLL1O43897 1013 aa26.04■■□□□ 1.76
VAPA-205ENST00000578314 CTDNEP1O95476 244 aa26.04■■□□□ 1.76
VAPA-205ENST00000578314 RPLP2P05387 115 aaKnown RBP26.04■■□□□ 1.76
VAPA-205ENST00000578314 IGBP1P78318 339 aa26.04■■□□□ 1.76
VAPA-205ENST00000578314 KRT76Q01546 638 aa26.04■■□□□ 1.76
VAPA-205ENST00000578314 MGAT3Q09327 533 aa26.04■■□□□ 1.76
VAPA-205ENST00000578314 CCDC60Q8IWA6 550 aaPredicted RBP26.04■■□□□ 1.76
VAPA-205ENST00000578314 SMAP1Q8IYB5 467 aaPredicted RBP26.04■■□□□ 1.76
VAPA-205ENST00000578314 USP38Q8NB14 1042 aa26.04■■□□□ 1.76
VAPA-205ENST00000578314 ZNF302Q9NR11 478 aa26.04■■□□□ 1.76
VAPA-205ENST00000578314 PCDHA2Q9Y5H9 948 aa26.04■■□□□ 1.76
VAPA-205ENST00000578314 VCANP13611 3396 aa26.03■■□□□ 1.76
VAPA-205ENST00000578314 CYP3A7-CYP3A51PA0A087WV96 503 aa26.03■■□□□ 1.76
VAPA-205ENST00000578314 MSH4O15457 936 aa26.03■■□□□ 1.76
VAPA-205ENST00000578314 GJB5O95377 273 aa26.03■■□□□ 1.76
VAPA-205ENST00000578314 CYP3A7P24462 503 aa26.03■■□□□ 1.76
VAPA-205ENST00000578314 SWSAP1Q6NVH7 229 aa26.03■■□□□ 1.76
VAPA-205ENST00000578314 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.03■■□□□ 1.76
VAPA-205ENST00000578314 TMCO2Q7Z6W1 182 aaPredicted RBP26.03■■□□□ 1.76
VAPA-205ENST00000578314 ATP8B4Q8TF62 1192 aa26.03■■□□□ 1.76
VAPA-205ENST00000578314 DNAJB3Q8WWF6 145 aa26.03■■□□□ 1.76
VAPA-205ENST00000578314 PHF20Q9BVI0 1012 aa26.03■■□□□ 1.76
VAPA-205ENST00000578314 PCDHA10Q9Y5I2 948 aa26.03■■□□□ 1.76
VAPA-205ENST00000578314 HBP1O60381 514 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 NEK4P51957 841 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 ADGRE1Q14246 886 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 ME3Q16798 604 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 Q4G0T1 1027 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 PDXDC2PQ6P474 469 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 APBB2Q92870 758 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 ZBTB10Q96DT7 871 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 RIT2Q99578 217 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms