RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 FOSP01100 380 aaPredicted RBP19.02■□□□□ 0.64
CDK5RAP3-206ENST00000578018 HMGB1P09429 215 aaKnown RBP19.02■□□□□ 0.64
CDK5RAP3-206ENST00000578018 MGAT3Q09327 533 aa19.02■□□□□ 0.64
CDK5RAP3-206ENST00000578018 MARCH8Q5T0T0 291 aa19.02■□□□□ 0.64
CDK5RAP3-206ENST00000578018 KCNB2Q92953 911 aa19.02■□□□□ 0.64
CDK5RAP3-206ENST00000578018 TOP1MTQ969P6 601 aa19.02■□□□□ 0.64
CDK5RAP3-206ENST00000578018 C17orf80Q9BSJ5 609 aa19.02■□□□□ 0.64
CDK5RAP3-206ENST00000578018 BARHL2Q9NY43 387 aa19.02■□□□□ 0.64
CDK5RAP3-206ENST00000578018 SLC9A2Q9UBY0 812 aa19.02■□□□□ 0.64
CDK5RAP3-206ENST00000578018 NFASCO94856 1347 aa19.01■□□□□ 0.63
CDK5RAP3-206ENST00000578018 GHRP10912 638 aa19.01■□□□□ 0.63
CDK5RAP3-206ENST00000578018 SREBF1P36956 1147 aa19.01■□□□□ 0.63
CDK5RAP3-206ENST00000578018 CLK2P49760 499 aaKnown RBP19.01■□□□□ 0.63
CDK5RAP3-206ENST00000578018 AP3B2Q13367 1082 aa19.01■□□□□ 0.63
CDK5RAP3-206ENST00000578018 CEP55Q53EZ4 464 aa19.01■□□□□ 0.63
CDK5RAP3-206ENST00000578018 FBXO22Q8NEZ5 403 aa19.01■□□□□ 0.63
CDK5RAP3-206ENST00000578018 NECAB3Q96P71 396 aaPredicted RBP19.01■□□□□ 0.63
CDK5RAP3-206ENST00000578018 TMEM260Q9NX78 707 aa19.01■□□□□ 0.63
CDK5RAP3-206ENST00000578018 LOXHD1Q8IVV2 1947 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 SMCO2A6NFE2 343 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 ARP10275 920 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 CPA1P15085 419 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 ITGB3BPQ13352 177 aaPredicted RBP19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 RSPH3Q86UC2 560 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 HLA-CQ95604 372 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 YME1L1Q96TA2 773 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 SDF4Q9BRK5 362 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 GLT8D2Q9H1C3 349 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 AGO4Q9HCK5 861 aaKnown RBP19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 NID2Q14112 1375 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 MYO7AQ13402 2215 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 TTC3P53804 2025 aa19■□□□□ 0.63
CDK5RAP3-206ENST00000578018 MEIS1O00470 390 aa18.99■□□□□ 0.63
CDK5RAP3-206ENST00000578018 UPP2O95045 317 aa18.99■□□□□ 0.63
CDK5RAP3-206ENST00000578018 METAP2P50579 478 aaKnown RBP eCLIP18.99■□□□□ 0.63
CDK5RAP3-206ENST00000578018 ACTR2P61160 394 aa18.99■□□□□ 0.63
CDK5RAP3-206ENST00000578018 IGBP1P78318 339 aa18.99■□□□□ 0.63
CDK5RAP3-206ENST00000578018 LPIN1Q14693 890 aa18.99■□□□□ 0.63
CDK5RAP3-206ENST00000578018 DNAJB3Q8WWF6 145 aa18.99■□□□□ 0.63
CDK5RAP3-206ENST00000578018 ZBTB10Q96DT7 871 aa18.99■□□□□ 0.63
CDK5RAP3-206ENST00000578018 AZI2Q9H6S1 392 aa18.99■□□□□ 0.63
CDK5RAP3-206ENST00000578018 NAP1L2Q9ULW6 460 aaPredicted RBP18.99■□□□□ 0.63
CDK5RAP3-206ENST00000578018 ATG2AQ2TAZ0 1938 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 RRN3P2A6NIE6 340 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 INSRRP14616 1297 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 HSPA4P34932 840 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 ADD1P35611 737 aaKnown RBP18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 FGD1P98174 961 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 APOBRQ0VD83 1088 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 PFKFB3Q16875 520 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 EPC2Q52LR7 807 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 FBXO47Q5MNV8 452 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 JAKMIP1Q96N16 626 aaKnown RBP18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 SAMD11Q96NU1 681 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 TRPC6Q9Y210 931 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 SNX14Q9Y5W7 946 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 CDY2AQ9Y6F7 541 aa18.98■□□□□ 0.63
CDK5RAP3-206ENST00000578018 RPLP2P05387 115 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-206ENST00000578018 SCG2P13521 617 aa18.97■□□□□ 0.63
CDK5RAP3-206ENST00000578018 MRPS6P82932 125 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-206ENST00000578018 PLCB4Q15147 1175 aa18.97■□□□□ 0.63
CDK5RAP3-206ENST00000578018 Q6ZUG5 572 aa18.97■□□□□ 0.63
CDK5RAP3-206ENST00000578018 NIPA1Q7RTP0 329 aa18.97■□□□□ 0.63
CDK5RAP3-206ENST00000578018 PLPPR4Q7Z2D5 763 aa18.97■□□□□ 0.63
CDK5RAP3-206ENST00000578018 CRYGNQ8WXF5 182 aa18.97■□□□□ 0.63
CDK5RAP3-206ENST00000578018 BRF1Q92994 677 aa18.97■□□□□ 0.63
CDK5RAP3-206ENST00000578018 FAM49AQ9H0Q0 323 aaPredicted RBP18.97■□□□□ 0.63
CDK5RAP3-206ENST00000578018 CCDC196A0A1B0GTZ2 297 aa18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 ESYT2A0FGR8 921 aa18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 FAM86B1E9PN63 330 aa18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 ATG7O95352 703 aa18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 CCNE2O96020 404 aa18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 FAM86B2P0C5J1 330 aa18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 STAT5BP51692 787 aa18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 BLOC1S2Q6QNY1 142 aa18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 TSHZ1Q6ZSZ6 1077 aa18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 TRAPPC12Q8WVT3 735 aa18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 RC3H2Q9HBD1 1191 aaKnown RBP18.96■□□□□ 0.63
CDK5RAP3-206ENST00000578018 MYH9P35579 1960 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 IGLV3-22A0A075B6J6 115 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 IGKV6D-21A0A0A0MT36 114 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ADAMTS3O15072 1205 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 PKN1Q16512 942 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 JAKMIP3Q5VZ66 844 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 TMEM192Q8IY95 271 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 FBXL16Q8N461 479 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 TNPO1Q92973 898 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 MRPL38Q96DV4 380 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 AGXT2Q9BYV1 514 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ZMYND12Q9H0C1 365 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 AGO3Q9H9G7 860 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 PCDHA2Q9Y5H9 948 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ADGRA3Q8IWK6 1321 aa18.95■□□□□ 0.62
CDK5RAP3-206ENST00000578018 WDR81Q562E7 1941 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 H3BNC9 293 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 CYP3A4P08684 503 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 LINC00271P0C7V0 271 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 RPS6KB1P23443 525 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ZNF76P36508 570 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 SLC26A2P50443 739 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms