RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 AZI2Q9H6S1 392 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 SUGCTQ9HAC7 445 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 FAM217BQ9NTX9 383 aaPredicted RBP17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 TUBE1Q9UJT0 475 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 NFASCO94856 1347 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 TTC3P53804 2025 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 CCDC196A0A1B0GTZ2 297 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 CHRNA1P02708 482 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 ARP10275 920 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 ZNF76P36508 570 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 IGBP1P78318 339 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 HTRA4P83105 476 aaPredicted RBP17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 APOBRQ0VD83 1088 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 AP3B2Q13367 1082 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 CEP55Q53EZ4 464 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 BLOC1S2Q6QNY1 142 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 RPAINQ86UA6 219 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 TOP1MTQ969P6 601 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 UHRF1Q96T88 793 aaPredicted RBP17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 YME1L1Q96TA2 773 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 TMEM260Q9NX78 707 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 LMCD1Q9NZU5 365 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 COG5Q9UP83 839 aa17.05■□□□□ 0.32
RN7SL560P-201ENST00000577943 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 RRN3P2A6NIE6 340 aa17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 GHRP10912 638 aa17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 ADD1P35611 737 aaKnown RBP17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 CLK2P49760 499 aaKnown RBP17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 FBXO22Q8NEZ5 403 aa17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 DNAJB3Q8WWF6 145 aa17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 KCNB2Q92953 911 aa17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 TNPO1Q92973 898 aaKnown RBP17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 BRF1Q92994 677 aa17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 PCYT2Q99447 389 aa17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 SNX14Q9Y5W7 946 aa17.04■□□□□ 0.32
RN7SL560P-201ENST00000577943 MYO7AQ13402 2215 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 MBLAC1A4D2B0 266 aaPredicted RBP17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 SCG2P13521 617 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 INSRRP14616 1297 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 HSPA4P34932 840 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 SREBF1P36956 1147 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 STAT5BP51692 787 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 KCNQ1P51787 676 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 ACTR2P61160 394 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 MARCH8Q5T0T0 291 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 JAKMIP3Q5VZ66 844 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 HLA-CQ95604 372 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 C17orf80Q9BSJ5 609 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 AGO4Q9HCK5 861 aaKnown RBP17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 TRPC6Q9Y210 931 aa17.03■□□□□ 0.32
RN7SL560P-201ENST00000577943 MEIS1O00470 390 aa17.02■□□□□ 0.32
RN7SL560P-201ENST00000577943 REC8O95072 547 aa17.02■□□□□ 0.32
RN7SL560P-201ENST00000577943 BMP1P13497 986 aa17.02■□□□□ 0.32
RN7SL560P-201ENST00000577943 MGAT3Q09327 533 aa17.02■□□□□ 0.32
RN7SL560P-201ENST00000577943 PLPPR4Q7Z2D5 763 aa17.02■□□□□ 0.32
RN7SL560P-201ENST00000577943 SP7Q8TDD2 431 aaPredicted RBP17.02■□□□□ 0.32
RN7SL560P-201ENST00000577943 CCDC12Q8WUD4 166 aaPredicted RBP17.02■□□□□ 0.32
RN7SL560P-201ENST00000577943 SAMD11Q96NU1 681 aa17.02■□□□□ 0.32
RN7SL560P-201ENST00000577943 CDY2AQ9Y6F7 541 aa17.02■□□□□ 0.32
RN7SL560P-201ENST00000577943 M0QZ92 97 aa17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 DDX39AO00148 427 aaKnown RBP17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 RPLP2P05387 115 aaKnown RBP17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 PSMA5P28066 241 aa17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 AKAP17AQ02040 695 aaKnown RBP17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 ITGB3BPQ13352 177 aaPredicted RBP17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 LPIN1Q14693 890 aa17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 PLCB4Q15147 1175 aa17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 FBXO47Q5MNV8 452 aa17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 NIPA1Q7RTP0 329 aa17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 PLA2G4DQ86XP0 818 aa17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 ZBTB10Q96DT7 871 aa17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 FAM49AQ9H0Q0 323 aaPredicted RBP17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 C6orf50Q9HD87 102 aa17.01■□□□□ 0.31
RN7SL560P-201ENST00000577943 POTEB3A0JP26 581 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 BACH1O14867 736 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 ATG7O95352 703 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 RPS6KB1P23443 525 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 MRPS6P82932 125 aaKnown RBP17■□□□□ 0.31
RN7SL560P-201ENST00000577943 EPC2Q52LR7 807 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 IER5Q5VY09 327 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 POTEBQ6S5H4 581 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 TSHZ1Q6ZSZ6 1077 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 TRAPPC12Q8WVT3 735 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 NECAB3Q96P71 396 aaPredicted RBP17■□□□□ 0.31
RN7SL560P-201ENST00000577943 ZMYND12Q9H0C1 365 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 ATG2AQ2TAZ0 1938 aa17■□□□□ 0.31
RN7SL560P-201ENST00000577943 ESYT2A0FGR8 921 aa16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 PRPF3O43395 683 aaKnown RBP16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 GNA11P29992 359 aa16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 PKN1Q16512 942 aa16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 FAM160B1Q5W0V3 765 aa16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 MCTP2Q6DN12 878 aa16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 TMEM192Q8IY95 271 aa16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 REXO1Q8N1G1 1221 aaKnown RBP16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 FBXL16Q8N461 479 aa16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 PHKBQ93100 1093 aa16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 IL17RAQ96F46 866 aa16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 PCDHA2Q9Y5H9 948 aa16.99■□□□□ 0.31
RN7SL560P-201ENST00000577943 COL4A6Q14031 1691 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms