RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 USP17L6PQ6QN14 398 aa18.31■□□□□ 0.52
VAPA-204ENST00000577901 TRIM50Q86XT4 487 aa18.31■□□□□ 0.52
VAPA-204ENST00000577901 MRPL38Q96DV4 380 aaKnown RBP18.31■□□□□ 0.52
VAPA-204ENST00000577901 CD320Q9NPF0 282 aa18.31■□□□□ 0.52
VAPA-204ENST00000577901 ZNF215Q9UL58 517 aaPredicted RBP18.31■□□□□ 0.52
VAPA-204ENST00000577901 MEIS2O14770 477 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 PRPF3O43395 683 aaKnown RBP18.3■□□□□ 0.52
VAPA-204ENST00000577901 NAPAP54920 295 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 CCT2P78371 535 aaKnown RBP18.3■□□□□ 0.52
VAPA-204ENST00000577901 ARHGAP4P98171 946 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 UTP14CQ5TAP6 766 aaKnown RBP18.3■□□□□ 0.52
VAPA-204ENST00000577901 WWC2Q6AWC2 1192 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 PPP1R18Q6NYC8 613 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 TEX2Q8IWB9 1127 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.3■□□□□ 0.52
VAPA-204ENST00000577901 IL17RAQ96F46 866 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 HCN4Q9Y3Q4 1203 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 TELO2Q9Y4R8 837 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 MICAL3Q7RTP6 2002 aa18.3■□□□□ 0.52
VAPA-204ENST00000577901 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.29■□□□□ 0.52
VAPA-204ENST00000577901 PI4K2BG5E9Z4 385 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 H3BNC9 293 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 CPLX1O14810 134 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 SP4Q02446 784 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 PFKFB3Q16875 520 aaPredicted RBP18.29■□□□□ 0.52
VAPA-204ENST00000577901 FAM26DQ5JW98 314 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 PCNX4Q63HM2 1172 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 CPLX2Q6PUV4 134 aaKnown RBP18.29■□□□□ 0.52
VAPA-204ENST00000577901 LMBR1Q8WVP7 490 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 APBB2Q92870 758 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 SENP7Q9BQF6 1050 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
VAPA-204ENST00000577901 GLT8D2Q9H1C3 349 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 BARHL2Q9NY43 387 aa18.29■□□□□ 0.52
VAPA-204ENST00000577901 FAM86C2PA6NEL3 165 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 SPDYE3A6NKU9 549 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 STXBP3O00186 592 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 GPR37L1O60883 481 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 SCG2P13521 617 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 IFNAR1P17181 557 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 ADAM17P78536 824 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 GPM6BQ13491 265 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 TIGD5Q53EQ6 642 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 PTCRAQ6ISU1 281 aaPredicted RBP18.28■□□□□ 0.52
VAPA-204ENST00000577901 XRRA1Q6P2D8 792 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 FAM178BQ8IXR5 827 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 TMEM192Q8IY95 271 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 BANK1Q8NDB2 785 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 CCDC12Q8WUD4 166 aaPredicted RBP18.28■□□□□ 0.52
VAPA-204ENST00000577901 PHKBQ93100 1093 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 RNF26Q9BY78 433 aaPredicted RBP18.28■□□□□ 0.52
VAPA-204ENST00000577901 IFIH1Q9BYX4 1025 aaKnown RBP18.28■□□□□ 0.52
VAPA-204ENST00000577901 NCOA5Q9HCD5 579 aaKnown RBP18.28■□□□□ 0.52
VAPA-204ENST00000577901 C11orf16Q9NQ32 467 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 ARIH1Q9Y4X5 557 aaPredicted RBP18.28■□□□□ 0.52
VAPA-204ENST00000577901 COL4A6Q14031 1691 aa18.28■□□□□ 0.52
VAPA-204ENST00000577901 SMCO2A6NFE2 343 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 IL9P15248 144 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 ADCY7P51828 1080 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 STK3Q13188 491 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 NTRK3Q16288 839 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 NLRX1Q86UT6 975 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 TRIM22Q8IYM9 498 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 GJD3Q8N144 294 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 GIMAP8Q8ND71 665 aaPredicted RBP18.27■□□□□ 0.52
VAPA-204ENST00000577901 SLC26A6Q9BXS9 759 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 EHMT1Q9H9B1 1298 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 RIC8AQ9NPQ8 531 aa18.27■□□□□ 0.52
VAPA-204ENST00000577901 NRCAMQ92823 1304 aa18.26■□□□□ 0.51
VAPA-204ENST00000577901 GRXCR2A6NFK2 248 aa18.26■□□□□ 0.51
VAPA-204ENST00000577901 CHRNA1P02708 482 aa18.26■□□□□ 0.51
VAPA-204ENST00000577901 TCF7P36402 384 aaPredicted RBP18.26■□□□□ 0.51
VAPA-204ENST00000577901 NEK4P51957 841 aa18.26■□□□□ 0.51
VAPA-204ENST00000577901 AK2P54819 239 aa18.26■□□□□ 0.51
VAPA-204ENST00000577901 SSRP1Q08945 709 aaKnown RBP18.26■□□□□ 0.51
VAPA-204ENST00000577901 UBE2SQ16763 222 aa18.26■□□□□ 0.51
VAPA-204ENST00000577901 PUS10Q3MIT2 529 aaKnown RBP18.26■□□□□ 0.51
VAPA-204ENST00000577901 TCEAL5Q5H9L2 206 aa18.26■□□□□ 0.51
VAPA-204ENST00000577901 NEK9Q8TD19 979 aa18.26■□□□□ 0.51
VAPA-204ENST00000577901 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
VAPA-204ENST00000577901 PCDHA6Q9UN73 950 aa18.26■□□□□ 0.51
VAPA-204ENST00000577901 PCDHA8Q9Y5H6 950 aa18.26■□□□□ 0.51
VAPA-204ENST00000577901 H3BQ06 376 aaPredicted RBP18.25■□□□□ 0.51
VAPA-204ENST00000577901 CDKL5O76039 1030 aa18.25■□□□□ 0.51
VAPA-204ENST00000577901 FOSP01100 380 aaPredicted RBP18.25■□□□□ 0.51
VAPA-204ENST00000577901 SSTR3P32745 418 aaPredicted RBP18.25■□□□□ 0.51
VAPA-204ENST00000577901 TYW1BQ6NUM6 668 aa18.25■□□□□ 0.51
VAPA-204ENST00000577901 RUFY4Q6ZNE9 571 aa18.25■□□□□ 0.51
VAPA-204ENST00000577901 RPAINQ86UA6 219 aa18.25■□□□□ 0.51
VAPA-204ENST00000577901 C6orf50Q9HD87 102 aa18.25■□□□□ 0.51
VAPA-204ENST00000577901 TPCN1Q9ULQ1 816 aa18.25■□□□□ 0.51
VAPA-204ENST00000577901 DOCK5Q9H7D0 1870 aa18.24■□□□□ 0.51
VAPA-204ENST00000577901 ATP9AO75110 1047 aa18.24■□□□□ 0.51
VAPA-204ENST00000577901 PKN1Q16512 942 aa18.24■□□□□ 0.51
VAPA-204ENST00000577901 TAF2Q6P1X5 1199 aa18.24■□□□□ 0.51
VAPA-204ENST00000577901 FIBCD1Q8N539 461 aa18.24■□□□□ 0.51
VAPA-204ENST00000577901 GPRASP2Q96D09 838 aa18.24■□□□□ 0.51
VAPA-204ENST00000577901 PABPC5Q96DU9 382 aaKnown RBP18.24■□□□□ 0.51
VAPA-204ENST00000577901 CDHR1Q96JP9 859 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms