RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 HAUS3Q68CZ6 603 aa14.28□□□□□ -0.12
MKS1-206ENST00000577824 NCAPH2Q6IBW4 605 aa14.28□□□□□ -0.12
MKS1-206ENST00000577824 KRI1Q8N9T8 703 aaKnown RBP14.28□□□□□ -0.12
MKS1-206ENST00000577824 LEO1Q8WVC0 666 aaPredicted RBP14.28□□□□□ -0.12
MKS1-206ENST00000577824 HSD17B14Q9BPX1 270 aa14.28□□□□□ -0.12
MKS1-206ENST00000577824 MTG1Q9BT17 334 aaPredicted RBP14.28□□□□□ -0.12
MKS1-206ENST00000577824 TFIP11Q9UBB9 837 aaKnown RBP14.28□□□□□ -0.12
MKS1-206ENST00000577824 ZNF215Q9UL58 517 aaPredicted RBP14.28□□□□□ -0.12
MKS1-206ENST00000577824 VWA3AA6NCI4 1184 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 LYPLA2O95372 231 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 TFRCP02786 760 aaKnown RBP14.27□□□□□ -0.13
MKS1-206ENST00000577824 P4HBP07237 508 aaKnown RBP14.27□□□□□ -0.13
MKS1-206ENST00000577824 ZNF286BP0CG31 522 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 RPA1P27694 616 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 CEBPZQ03701 1054 aaKnown RBP14.27□□□□□ -0.13
MKS1-206ENST00000577824 GRIN1Q05586 938 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 UGCGQ16739 394 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 FOXD4L6Q3SYB3 417 aaPredicted RBP14.27□□□□□ -0.13
MKS1-206ENST00000577824 HYIQ5T013 277 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 FAM160B1Q5W0V3 765 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 CXCL17Q6UXB2 119 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 FOXD4L3Q6VB84 417 aaPredicted RBP14.27□□□□□ -0.13
MKS1-206ENST00000577824 SESTD1Q86VW0 696 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 TRIM50Q86XT4 487 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 ZNF579Q8NAF0 562 aaKnown RBP14.27□□□□□ -0.13
MKS1-206ENST00000577824 SLC43A3Q8NBI5 491 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 TNPO1Q92973 898 aaKnown RBP14.27□□□□□ -0.13
MKS1-206ENST00000577824 ATP6V0A1Q93050 837 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 CHAMP1Q96JM3 812 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 EIF2AK1Q9BQI3 630 aaKnown RBP14.27□□□□□ -0.13
MKS1-206ENST00000577824 MMTAG2Q9BU76 263 aaKnown RBP14.27□□□□□ -0.13
MKS1-206ENST00000577824 POLR3CQ9BUI4 534 aaPredicted RBP14.27□□□□□ -0.13
MKS1-206ENST00000577824 SEZ6LQ9BYH1 1024 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 SMARCAD1Q9H4L7 1026 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 TUFT1Q9NNX1 390 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 ZNF302Q9NR11 478 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 ERAP1Q9NZ08 941 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 LRWD1Q9UFC0 647 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 SAMM50Q9Y512 469 aa14.27□□□□□ -0.13
MKS1-206ENST00000577824 H3BRB1 525 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 ZNF862O60290 1169 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 MYL3P08590 195 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 SPATA31C1P0DKV0 1188 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 MARCKSP29966 332 aaPredicted RBP14.26□□□□□ -0.13
MKS1-206ENST00000577824 STAT5BP51692 787 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 PSMC5P62195 406 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 SNX17Q15036 470 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 AXDND1Q5T1B0 1012 aaPredicted RBP14.26□□□□□ -0.13
MKS1-206ENST00000577824 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 KCTD17Q8N5Z5 321 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 SPATA32Q96LK8 384 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 LXNQ9BS40 222 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 TUT1Q9H6E5 874 aaKnown RBP14.26□□□□□ -0.13
MKS1-206ENST00000577824 AZI2Q9H6S1 392 aa14.26□□□□□ -0.13
MKS1-206ENST00000577824 WRAP73Q9P2S5 460 aaPredicted RBP14.26□□□□□ -0.13
MKS1-206ENST00000577824 KIAA0100Q14667 2235 aaKnown RBP14.26□□□□□ -0.13
MKS1-206ENST00000577824 GRIN2DO15399 1336 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 KDM3AQ9Y4C1 1321 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 DKC1O60832 514 aaKnown RBP eCLIP14.25□□□□□ -0.13
MKS1-206ENST00000577824 CUTAO60888 179 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 SLITRK3O94933 977 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 STBD1O95210 358 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 ATP4AP20648 1035 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 QARSP47897 775 aaKnown RBP14.25□□□□□ -0.13
MKS1-206ENST00000577824 MFSD10Q14728 455 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 SWSAP1Q6NVH7 229 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 PDXDC2PQ6P474 469 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 C4orf19Q8IY42 314 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 TMEM87AQ8NBN3 555 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 ERMNQ8TAM6 284 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
MKS1-206ENST00000577824 FAM167AQ96KS9 214 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 GLT1D1Q96MS3 346 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 CSRNP2Q9H175 543 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 ZSWIM4Q9H7M6 989 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 GABBR1Q9UBS5 961 aa14.25□□□□□ -0.13
MKS1-206ENST00000577824 TCHHQ07283 1943 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
MKS1-206ENST00000577824 PP2D1A8MPX8 630 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 BACH1O14867 736 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 MED24O75448 989 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 NCLP19338 710 aaKnown RBP14.24□□□□□ -0.13
MKS1-206ENST00000577824 EN2P19622 333 aaPredicted RBP14.24□□□□□ -0.13
MKS1-206ENST00000577824 PSEN2P49810 448 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 PRKCEQ02156 737 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 PTPN11Q06124 597 aaPredicted RBP14.24□□□□□ -0.13
MKS1-206ENST00000577824 PLCB4Q15147 1175 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 KIAA0753Q2KHM9 967 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 UTP14CQ5TAP6 766 aaKnown RBP14.24□□□□□ -0.13
MKS1-206ENST00000577824 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 CATSPER3Q86XQ3 398 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 BANK1Q8NDB2 785 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 SNX29Q8TEQ0 813 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 ATP8B4Q8TF62 1192 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 BBXQ8WY36 941 aaPredicted RBP14.24□□□□□ -0.13
MKS1-206ENST00000577824 GLG1Q92896 1179 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 DYDC2Q96IM9 177 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 CCSER1Q9C0I3 900 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 STARD7Q9NQZ5 370 aa14.24□□□□□ -0.13
MKS1-206ENST00000577824 PCDHA7Q9UN72 937 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms