RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 NLRC5Q86WI3 1866 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 MBLAC1A4D2B0 266 aaPredicted RBP15.37■□□□□ 0.05
COPS3-214ENST00000577246 RRN3P2A6NIE6 340 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 LOC730098B7Z3J9 87 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 RBAK-RBAKDNI3L0D1 243 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 PIK3CDO00329 1044 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 IFIT3O14879 490 aaKnown RBP15.37■□□□□ 0.05
COPS3-214ENST00000577246 MRPS6P82932 125 aaKnown RBP15.37■□□□□ 0.05
COPS3-214ENST00000577246 ZXDAP98168 799 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 CATIPQ7Z7H3 387 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 RALYLQ86SE5 291 aaKnown RBP15.37■□□□□ 0.05
COPS3-214ENST00000577246 CHD1LQ86WJ1 897 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 PRSS33Q8NF86 280 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 DNAJB3Q8WWF6 145 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
COPS3-214ENST00000577246 SMARCAD1Q9H4L7 1026 aa15.37■□□□□ 0.05
COPS3-214ENST00000577246 MRPL42Q9Y6G3 142 aaKnown RBP15.37■□□□□ 0.05
COPS3-214ENST00000577246 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
COPS3-214ENST00000577246 CYTH3O43739 400 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 ITGB1P05556 798 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 SRGAP2BP0DMP2 458 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 MARK3P27448 753 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 CAMK1Q14012 370 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 CBX2Q14781 532 aaPredicted RBP15.36■□□□□ 0.05
COPS3-214ENST00000577246 WTAPQ15007 396 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 CYB5R4Q7L1T6 521 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 PLEKHM2Q8IWE5 1019 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 SMC5Q8IY18 1101 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 FBXL6Q8N531 539 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 SPPL3Q8TCT6 385 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 POF1BQ8WVV4 589 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 RRP36Q96EU6 259 aaKnown RBP15.36■□□□□ 0.05
COPS3-214ENST00000577246 PHF7Q9BWX1 381 aaPredicted RBP15.36■□□□□ 0.05
COPS3-214ENST00000577246 AAASQ9NRG9 546 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 SEC63Q9UGP8 760 aaKnown RBP15.36■□□□□ 0.05
COPS3-214ENST00000577246 LRFN2Q9ULH4 789 aa15.36■□□□□ 0.05
COPS3-214ENST00000577246 CD52P31358 61 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 KIF5BP33176 963 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 NRIP1P48552 1158 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 UBE3AQ05086 875 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 SIGLEC14Q08ET2 396 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 TROAPQ12815 778 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 PAK2Q13177 524 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 SLC35G1Q2M3R5 365 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 KLHL23Q8NBE8 558 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 CDCA3Q99618 268 aaPredicted RBP15.35■□□□□ 0.05
COPS3-214ENST00000577246 CLEC1BQ9P126 229 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 USP15Q9Y4E8 981 aaPredicted RBP15.35■□□□□ 0.05
COPS3-214ENST00000577246 SUPT16HQ9Y5B9 1047 aaKnown RBP15.35■□□□□ 0.05
COPS3-214ENST00000577246 PCDHB12Q9Y5F1 795 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 TRPV2Q9Y5S1 764 aa15.35■□□□□ 0.05
COPS3-214ENST00000577246 MAFGO15525 162 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 SCG2P13521 617 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 KCNA2P16389 499 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 ATF7P17544 494 aaPredicted RBP15.34■□□□□ 0.05
COPS3-214ENST00000577246 MTMR1Q13613 665 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 PDE12Q6L8Q7 609 aaKnown RBP15.34■□□□□ 0.05
COPS3-214ENST00000577246 USP17L6PQ6QN14 398 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 CTCFLQ8NI51 663 aaPredicted RBP15.34■□□□□ 0.05
COPS3-214ENST00000577246 MICAL1Q8TDZ2 1067 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 MAP3K14Q99558 947 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 LZTS2Q9BRK4 669 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 SPZ1Q9BXG8 430 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 FAM49AQ9H0Q0 323 aaPredicted RBP15.34■□□□□ 0.05
COPS3-214ENST00000577246 AZI2Q9H6S1 392 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 TLE6Q9H808 572 aa15.34■□□□□ 0.05
COPS3-214ENST00000577246 WDFY4Q6ZS81 3184 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 DNAJB1P25685 340 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 SMARCA1P28370 1054 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 NUBP1P53384 320 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 IGBP1P78318 339 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 NUCB1Q02818 461 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 PAN2Q504Q3 1202 aaKnown RBP15.33■□□□□ 0.04
COPS3-214ENST00000577246 ODR4Q5SWX8 454 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 MARCH8Q5T0T0 291 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 IER5LQ5T953 404 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 ADGRD2Q7Z7M1 963 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 RBM23Q86U06 439 aaKnown RBP15.33■□□□□ 0.04
COPS3-214ENST00000577246 CRIPAKQ8N1N5 446 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 NCOA7Q8NI08 942 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 LINC01599Q8WXQ3 324 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 AGO3Q9H9G7 860 aaKnown RBP15.33■□□□□ 0.04
COPS3-214ENST00000577246 PADI3Q9ULW8 664 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 BARX2Q9UMQ3 279 aaPredicted RBP15.33■□□□□ 0.04
COPS3-214ENST00000577246 TRPC6Q9Y210 931 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 TELO2Q9Y4R8 837 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 IGSF9BQ9UPX0 1349 aa15.33■□□□□ 0.04
COPS3-214ENST00000577246 ZNF318Q5VUA4 2279 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 GSTTP1A0A1W2PQM5 241 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 MEIS2O14770 477 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 INSRRP14616 1297 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 GNAQP50148 359 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 TCF15Q12870 199 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 SPOUT1Q5T280 376 aaKnown RBP15.32■□□□□ 0.04
COPS3-214ENST00000577246 NME8Q8N427 588 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 RPGRIP1Q96KN7 1286 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 NEK1Q96PY6 1258 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms