RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 CTCFLQ8NI51 663 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 DNAJB3Q8WWF6 145 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 RUFY2Q8WXA3 655 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 SEPT1Q8WYJ6 367 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 SPZ1Q9BXG8 430 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 SMARCAD1Q9H4L7 1026 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 ALG13Q9NP73 1137 aaKnown RBP13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 PLAGL2Q9UPG8 496 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 TELO2Q9Y4R8 837 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 CDY2AQ9Y6F7 541 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 KIAA1671Q9BY89 1806 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 ZNF318Q5VUA4 2279 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 RRN3P2A6NIE6 340 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 M0QZ92 97 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 MEIS2O14770 477 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 CYP21A2P08686 494 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 KCNA2P16389 499 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 MRPS6P82932 125 aaKnown RBP13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 ADAM15Q13444 863 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 MTMR1Q13613 665 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 IER5Q5VY09 327 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 CMTR2Q8IYT2 770 aaKnown RBP13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 TNPO1Q92973 898 aaKnown RBP13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 MAP3K14Q99558 947 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 IL25Q9H293 177 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 SENP2Q9HC62 589 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 MRPL42Q9Y6G3 142 aaKnown RBP13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 SQORQ9Y6N5 450 aa13.38□□□□□ -0.27
CTDNEP1-212ENST00000576613 E7EWF7 191 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 LINC01565O15544 149 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 DDAH1O94760 285 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 IGHDP01880 384 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 STAG3L1P0CL83 205 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 SMARCA1P28370 1054 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 GTF2F1P35269 517 aaKnown RBP eCLIP13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 PKN1Q16512 942 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 MARCH8Q5T0T0 291 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 NPAS4Q8IUM7 802 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 EDAQ92838 391 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 MSLNLQ96KJ4 702 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 LZTS2Q9BRK4 669 aa13.37□□□□□ -0.27
CTDNEP1-212ENST00000576613 GSTTP1A0A1W2PQM5 241 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 MAFGO15525 162 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 ATP9AO75110 1047 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 EYA4O95677 639 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 CD52P31358 61 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 GNAQP50148 359 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 IGBP1P78318 339 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 PAK2Q13177 524 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 CAMK1Q14012 370 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 BMP8AQ7Z5Y6 402 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 ZNF654Q8IZM8 581 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 EFHBQ8N7U6 833 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 SMRP1Q8NCR6 262 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 PRRX2Q99811 253 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 FAM49AQ9H0Q0 323 aaPredicted RBP13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 AZI2Q9H6S1 392 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 AGO3Q9H9G7 860 aaKnown RBP13.36□□□□□ -0.27
CTDNEP1-212ENST00000576613 FSD2A1L4K1 749 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 SPDYE3A6NKU9 549 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 ITGB1P05556 798 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 SCG2P13521 617 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 INSRRP14616 1297 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 ITGB5P18084 799 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 NRIP1P48552 1158 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 COASYQ13057 564 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 PAN2Q504Q3 1202 aaKnown RBP13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 FAM43BQ6ZT52 329 aaPredicted RBP13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 SUGP1Q8IWZ8 645 aaKnown RBP13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 KLHL23Q8NBE8 558 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 SPPL3Q8TCT6 385 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 IGDCC4Q8TDY8 1250 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 JPH1Q9HDC5 661 aaPredicted RBP13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 PKD2L1Q9P0L9 805 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 LRFN2Q9ULH4 789 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 PADI3Q9ULW8 664 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 TRPC6Q9Y210 931 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 TRPV2Q9Y5S1 764 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 IGSF9BQ9UPX0 1349 aa13.35□□□□□ -0.27
CTDNEP1-212ENST00000576613 PLXNA4Q9HCM2 1894 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 TMEM221A6NGB7 291 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 M0R296 226 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 DNAJB1P25685 340 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 PTPN5P54829 565 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 PTH1RQ03431 593 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 TMEM62Q0P6H9 643 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 CASC1Q6TDU7 716 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 TRIM67Q6ZTA4 783 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 ADGRD2Q7Z7M1 963 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 CRIPAKQ8N1N5 446 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 POF1BQ8WVV4 589 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 PBXIP1Q96AQ6 731 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 MYL10Q9BUA6 226 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 LY9Q9HBG7 655 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 JADE2Q9NQC1 790 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 CLEC1BQ9P126 229 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms