RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 LGR5O75473 907 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 TDP2O95551 362 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 PSAPP07602 524 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 RSPH10BP0C881 870 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 KCNJ6P48051 423 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 SLC26A2P50443 739 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 GNL2Q13823 731 aaKnown RBP17.26■□□□□ 0.35
SMG6-220ENST00000576218 ZNF618Q5T7W0 954 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 PDXDC2PQ6P474 469 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 NEK8Q86SG6 692 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 SMAP1Q8IYB5 467 aaPredicted RBP17.26■□□□□ 0.35
SMG6-220ENST00000576218 CTAGE1Q96RT6 745 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 NAP1L4Q99733 375 aaKnown RBP17.26■□□□□ 0.35
SMG6-220ENST00000576218 DDX25Q9UHL0 483 aaKnown RBP17.26■□□□□ 0.35
SMG6-220ENST00000576218 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 TANC1Q9C0D5 1861 aa17.26■□□□□ 0.35
SMG6-220ENST00000576218 POTEB3A0JP26 581 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 RRN3P2A6NIE6 340 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 WDR64B1ANS9 1081 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 CCNT1O60563 726 aaKnown RBP17.25■□□□□ 0.35
SMG6-220ENST00000576218 CCNE2O96020 404 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 FDPSP14324 419 aaKnown RBP17.25■□□□□ 0.35
SMG6-220ENST00000576218 HMGN5P82970 282 aaKnown RBP17.25■□□□□ 0.35
SMG6-220ENST00000576218 RBL2Q08999 1139 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 HIC1Q14526 733 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 Q4G0T1 1027 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 SWSAP1Q6NVH7 229 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 TAF2Q6P1X5 1199 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 POTEBQ6S5H4 581 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 Q7L0L9 218 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 PLPPR4Q7Z2D5 763 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 TRMT1LQ7Z2T5 733 aaKnown RBP17.25■□□□□ 0.35
SMG6-220ENST00000576218 OXER1Q8TDS5 423 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 FAM161BQ96MY7 647 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 KIF2CQ99661 725 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 LLPHQ9BRT6 129 aaKnown RBP17.25■□□□□ 0.35
SMG6-220ENST00000576218 PCDHA10Q9Y5I2 948 aa17.25■□□□□ 0.35
SMG6-220ENST00000576218 M0R2N6 131 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 CAND2O75155 1236 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 INSRRP14616 1297 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 GCFC2P16383 781 aaKnown RBP17.24■□□□□ 0.35
SMG6-220ENST00000576218 JAK3P52333 1124 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 PLCB4Q15147 1175 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 NPY5RQ15761 445 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 MOXD1Q6UVY6 613 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 ABHD15Q6UXT9 468 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 CCDC60Q8IWA6 550 aaPredicted RBP17.24■□□□□ 0.35
SMG6-220ENST00000576218 WNT8BQ93098 351 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 C8orf76Q96K31 380 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 PCYT2Q99447 389 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 RIT2Q99578 217 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 CXXC1Q9P0U4 656 aaPredicted RBP17.24■□□□□ 0.35
SMG6-220ENST00000576218 MSRAQ9UJ68 235 aa17.24■□□□□ 0.35
SMG6-220ENST00000576218 M0QZ92 97 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 DHX15O43143 795 aaKnown RBP17.23■□□□□ 0.35
SMG6-220ENST00000576218 ATG7O95352 703 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 MMP1P03956 469 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 ATP2A2P16615 1042 aaKnown RBP17.23■□□□□ 0.35
SMG6-220ENST00000576218 HOXC8P31273 242 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 SFNP31947 248 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 GUCY1B3Q02153 619 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 NR5A1Q13285 461 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 RAB30Q15771 203 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 TRIM71Q2Q1W2 868 aaKnown RBP17.23■□□□□ 0.35
SMG6-220ENST00000576218 KRT40Q6A162 431 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 CNKSR3Q6P9H4 555 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 MIER3Q7Z3K6 550 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 DIS3L2Q8IYB7 885 aaKnown RBP17.23■□□□□ 0.35
SMG6-220ENST00000576218 LENG9Q96B70 501 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 FAM49AQ9H0Q0 323 aaPredicted RBP17.23■□□□□ 0.35
SMG6-220ENST00000576218 DISC1Q9NRI5 854 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 GABBR1Q9UBS5 961 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 KIF3AQ9Y496 699 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 KAT6AQ92794 2004 aa17.23■□□□□ 0.35
SMG6-220ENST00000576218 TRIP12Q14669 1992 aaPredicted RBP17.22■□□□□ 0.35
SMG6-220ENST00000576218 SCN5AQ14524 2016 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 GRXCR1A8MXD5 290 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 HBP1O60381 514 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 BAIAP3O94812 1187 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 DNAJB2P25686 324 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 ST3GAL1Q11201 340 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 RUFY4Q6ZNE9 571 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 ATP8B4Q8TF62 1192 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 SLC5A5Q92911 643 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 GJA10Q969M2 543 aa17.22■□□□□ 0.35
SMG6-220ENST00000576218 LAMA3Q16787 3333 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 CYP3A7-CYP3A51PA0A087WV96 503 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 NBNO60934 754 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 BAG4O95429 457 aaKnown RBP17.21■□□□□ 0.35
SMG6-220ENST00000576218 RPLP2P05387 115 aaKnown RBP17.21■□□□□ 0.35
SMG6-220ENST00000576218 CYP3A7P24462 503 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 IKBKEQ14164 716 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 RASIP1Q5U651 963 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 FAM109BQ6ICB4 259 aaPredicted RBP17.21■□□□□ 0.35
SMG6-220ENST00000576218 TRAPPC12Q8WVT3 735 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 DNAJB3Q8WWF6 145 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 TIFAQ96CG3 184 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 FAM167AQ96KS9 214 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 TBC1D32Q96NH3 1257 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms