RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 ANKARQ7Z5J8 1434 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 GOLGA8TH3BQL2 631 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 O00370 1275 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 IGF2BP3O00425 579 aaKnown RBP eCLIP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 MFAP3LO75121 409 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 VAMP4O75379 141 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 TACC1O75410 805 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 ATP5HO75947 161 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 ASMTLO95671 621 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 GNAI2P04899 355 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 GOLGA8HP0CJ92 632 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 PRLRP16471 622 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 FUT4P22083 530 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 S100A5P33763 92 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 HSPA9P38646 679 aaKnown RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 ME1P48163 572 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 ZNF132P52740 706 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 RAD23BP54727 409 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 ADKP55263 362 aaKnown RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 DCTN2Q13561 401 aaKnown RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 QPCTQ16769 361 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 WASHC4Q2M389 1173 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 LIN52Q52LA3 116 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 WASHC2DQ5SRD0 308 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 SYCP2LQ5T4T6 812 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 KANK3Q6NY19 840 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 ZNF804AQ7Z570 1209 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 PIGWQ7Z7B1 504 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 NUTM2AQ8IVF1 878 aaPredicted RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 SULF1Q8IWU6 871 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 ANKRD13AQ8IZ07 590 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 SPICE1Q8N0Z3 855 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 RDH13Q8NBN7 331 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 VPS37AQ8NEZ2 397 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 UHMK1Q8TAS1 419 aaKnown RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 CCDC42Q96M95 316 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 PLCB1Q9NQ66 1216 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 INTS13Q9NVM9 706 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 MTUS1Q9ULD2 1270 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 PPP1R9AQ9ULJ8 1098 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 DYTNA2CJ06 578 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 NVLO15381 856 aaKnown RBP8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 LCA5LO95447 670 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 YEATS4O95619 227 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 KRT14P02533 472 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 MYBL1P10243 752 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 NFKBIAP25963 317 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 VHLP40337 213 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 PDE6CP51160 858 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 COPS2P61201 443 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 MSLNQ13421 630 aaPredicted RBP8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 GALNTL6Q49A17 601 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 DEPDC1Q5TB30 811 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 GSPT2Q8IYD1 628 aaKnown RBP8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 GABPB2Q8TAK5 448 aaPredicted RBP8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 RAPGEF5Q92565 580 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 EVI5LQ96CN4 794 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 MPP4Q96JB8 637 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 VPS50Q96JG6 964 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 CCDC43Q96MW1 224 aaKnown RBP8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 FAM129AQ9BZQ8 928 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 ECT2Q9H8V3 914 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 IKBKGQ9Y6K9 419 aa8.65□□□□□ -1.02
TOM1L1-220ENST00000575333 CDC42BPGQ6DT37 1551 aa8.65□□□□□ -1.03
TOM1L1-220ENST00000575333 NSD3Q9BZ95 1437 aa8.65□□□□□ -1.03
TOM1L1-220ENST00000575333 NEXMIFQ5QGS0 1516 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 MARCH6O60337 910 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 PABPC4LP0CB38 370 aaKnown RBP8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 GSTT2P0CG29 244 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 GSTT2BP0CG30 244 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 TMOD1P28289 359 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 ADD1P35611 737 aaKnown RBP8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 SPCS2Q15005 226 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 R3HDM1Q15032 1099 aaKnown RBP8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 NONOQ15233 471 aaKnown RBP eCLIP8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 CCDC122Q5T0U0 273 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 CCDC102BQ68D86 513 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 AGGF1Q8N302 714 aaeCLIP8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 GATA6Q92908 595 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 ABTB1Q969K4 478 aaPredicted RBP8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 ZNF333Q96JL9 665 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 SLC7A5P2Q9GIP4 190 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 CCDC134Q9H6E4 229 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 ATAD3AQ9NVI7 634 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 HSFX1Q9UBD0 423 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 PNMA2Q9UL42 364 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 TBC1D30Q9Y2I9 924 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 TSC22D4Q9Y3Q8 395 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 QRICH2Q9H0J4 1663 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 NEDD4P46934 1319 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 PPLO60437 1756 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 A0A1B0GTH6 734 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 SERPINB7O75635 380 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 TPBGLP0DKB5 382 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 RARAP10276 462 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 ZNF18P17022 549 aa8.64□□□□□ -1.03
TOM1L1-220ENST00000575333 PTPN2P17706 415 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms