RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 COL4A4P53420 1690 aaPredicted RBP12.03□□□□□ -0.48
LITAF-216ENST00000574848 IGLV3-22A0A075B6J6 115 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 MBLAC1A4D2B0 266 aaPredicted RBP12.03□□□□□ -0.48
LITAF-216ENST00000574848 PDCP20941 246 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 THPOP40225 353 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 RABGGTBP53611 331 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 SP4Q02446 784 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 ITGB3BPQ13352 177 aaPredicted RBP12.03□□□□□ -0.48
LITAF-216ENST00000574848 TCTN1Q2MV58 587 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 PLEKHG4Q58EX7 1191 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 FAM26DQ5JW98 314 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 UTP14CQ5TAP6 766 aaKnown RBP12.03□□□□□ -0.48
LITAF-216ENST00000574848 PPP2R2DQ66LE6 453 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 TAF2Q6P1X5 1199 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 FAM177A1Q8N128 213 aaPredicted RBP12.03□□□□□ -0.48
LITAF-216ENST00000574848 CYP2W1Q8TAV3 490 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 PHKBQ93100 1093 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 ZNF274Q96GC6 653 aaPredicted RBP12.03□□□□□ -0.48
LITAF-216ENST00000574848 PCYT2Q99447 389 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 SMARCAD1Q9H4L7 1026 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 C6orf50Q9HD87 102 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 SH3GLB2Q9NR46 395 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 SETD4Q9NVD3 440 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 SLC9A2Q9UBY0 812 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 ATP6V1DQ9Y5K8 247 aa12.03□□□□□ -0.48
LITAF-216ENST00000574848 IGKV6D-21A0A0A0MT36 114 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 RSPH10B2B2RC85 870 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 FAM86B1E9PN63 330 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 ADAMTS3O15072 1205 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 ATG7O95352 703 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 CA3P07451 260 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 FAM86B2P0C5J1 330 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 RSPH10BP0C881 870 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 ARP10275 920 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 MYOGP15173 224 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 GNA11P29992 359 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 KCNJ6P48051 423 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 SETQ01105 290 aaPredicted RBP12.02□□□□□ -0.49
LITAF-216ENST00000574848 PPFIA1Q13136 1202 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.02□□□□□ -0.49
LITAF-216ENST00000574848 BICD2Q8TD16 824 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 GAS2L1Q99501 681 aaPredicted RBP12.02□□□□□ -0.49
LITAF-216ENST00000574848 SDF4Q9BRK5 362 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 PRDM12Q9H4Q4 367 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 NCOA5Q9HCD5 579 aaKnown RBP12.02□□□□□ -0.49
LITAF-216ENST00000574848 KIF3AQ9Y496 699 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 KAT6AQ92794 2004 aa12.02□□□□□ -0.49
LITAF-216ENST00000574848 DHX15O43143 795 aaKnown RBP12.01□□□□□ -0.49
LITAF-216ENST00000574848 RPLP2P05387 115 aaKnown RBP12.01□□□□□ -0.49
LITAF-216ENST00000574848 CIITAP33076 1130 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 SLC26A2P50443 739 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 ACTR2P61160 394 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 DEFB103AP81534 67 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 AKAP17AQ02040 695 aaKnown RBP12.01□□□□□ -0.49
LITAF-216ENST00000574848 IKBKEQ14164 716 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 ADGRE1Q14246 886 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 GRIK4Q16099 956 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 MARCH8Q5T0T0 291 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 JAKMIP3Q5VZ66 844 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 PLPPR4Q7Z2D5 763 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 SLC26A6Q9BXS9 759 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 PKD2L1Q9P0L9 805 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 TUBE1Q9UJT0 475 aa12.01□□□□□ -0.49
LITAF-216ENST00000574848 RRN3P2A6NIE6 340 aa12□□□□□ -0.49
LITAF-216ENST00000574848 KIF28PB7ZC32 967 aa12□□□□□ -0.49
LITAF-216ENST00000574848 ARHGEF15O94989 841 aa12□□□□□ -0.49
LITAF-216ENST00000574848 GJB5O95377 273 aa12□□□□□ -0.49
LITAF-216ENST00000574848 BAG4O95429 457 aaKnown RBP12□□□□□ -0.49
LITAF-216ENST00000574848 BRD1O95696 1058 aa12□□□□□ -0.49
LITAF-216ENST00000574848 CCNE2O96020 404 aa12□□□□□ -0.49
LITAF-216ENST00000574848 POU3F3P20264 500 aaPredicted RBP12□□□□□ -0.49
LITAF-216ENST00000574848 CCT2P78371 535 aaKnown RBP12□□□□□ -0.49
LITAF-216ENST00000574848 TAP1Q03518 808 aa12□□□□□ -0.49
LITAF-216ENST00000574848 MGAT3Q09327 533 aa12□□□□□ -0.49
LITAF-216ENST00000574848 GSE1Q14687 1217 aa12□□□□□ -0.49
LITAF-216ENST00000574848 PLA2G4DQ86XP0 818 aa12□□□□□ -0.49
LITAF-216ENST00000574848 CCDC83Q8IWF9 413 aa12□□□□□ -0.49
LITAF-216ENST00000574848 TRIM22Q8IYM9 498 aa12□□□□□ -0.49
LITAF-216ENST00000574848 USP38Q8NB14 1042 aa12□□□□□ -0.49
LITAF-216ENST00000574848 DAGLBQ8NCG7 672 aa12□□□□□ -0.49
LITAF-216ENST00000574848 DBF4BQ8NFT6 615 aa12□□□□□ -0.49
LITAF-216ENST00000574848 APBB2Q92870 758 aa12□□□□□ -0.49
LITAF-216ENST00000574848 GLG1Q92896 1179 aa12□□□□□ -0.49
LITAF-216ENST00000574848 LENG9Q96B70 501 aa12□□□□□ -0.49
LITAF-216ENST00000574848 LLPHQ9BRT6 129 aaKnown RBP12□□□□□ -0.49
LITAF-216ENST00000574848 AZI2Q9H6S1 392 aa12□□□□□ -0.49
LITAF-216ENST00000574848 VPS54Q9P1Q0 977 aa12□□□□□ -0.49
LITAF-216ENST00000574848 A0A0C4DFX4 3053 aa12□□□□□ -0.49
LITAF-216ENST00000574848 M0R2N6 131 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 IPO5O00410 1097 aaKnown RBP11.99□□□□□ -0.49
LITAF-216ENST00000574848 TLL1O43897 1013 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 DEXIO95424 95 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 CTSHP09668 335 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 MARK3P27448 753 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 ZNF76P36508 570 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 PLCB4Q15147 1175 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 NPY5RQ15761 445 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 ME3Q16798 604 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 ABHD15Q6UXT9 468 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 RUFY4Q6ZNE9 571 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms