RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 APBB2Q92870 758 aa24.13■■□□□ 1.45
CHRNB1-206ENST00000574054 GLT8D2Q9H1C3 349 aa24.13■■□□□ 1.45
CHRNB1-206ENST00000574054 SUGCTQ9HAC7 445 aa24.13■■□□□ 1.45
CHRNB1-206ENST00000574054 ARP10275 920 aa24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 ADD1P35611 737 aaKnown RBP24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 ZNF76P36508 570 aa24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 KCNQ1P51787 676 aa24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 RCAN1P53805 252 aa24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 HTRA4P83105 476 aaPredicted RBP24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 FBXO22Q8NEZ5 403 aa24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 BRF1Q92994 677 aa24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 PCYT2Q99447 389 aa24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 C17orf80Q9BSJ5 609 aa24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 COG5Q9UP83 839 aa24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 TRPC6Q9Y210 931 aa24.12■■□□□ 1.45
CHRNB1-206ENST00000574054 CCDC196A0A1B0GTZ2 297 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 SREBF1P36956 1147 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 ACTR2P61160 394 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 AP3B2Q13367 1082 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 BLOC1S2Q6QNY1 142 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 RPAINQ86UA6 219 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 DNAJB3Q8WWF6 145 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 TOP1MTQ969P6 601 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 ZBTB10Q96DT7 871 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 AGO4Q9HCK5 861 aaKnown RBP24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 LMCD1Q9NZU5 365 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 SNX14Q9Y5W7 946 aa24.11■■□□□ 1.45
CHRNB1-206ENST00000574054 NFASCO94856 1347 aa24.1■■□□□ 1.45
CHRNB1-206ENST00000574054 MBLAC1A4D2B0 266 aaPredicted RBP24.1■■□□□ 1.45
CHRNB1-206ENST00000574054 INSRRP14616 1297 aa24.1■■□□□ 1.45
CHRNB1-206ENST00000574054 MARCH8Q5T0T0 291 aa24.1■■□□□ 1.45
CHRNB1-206ENST00000574054 JAKMIP3Q5VZ66 844 aa24.1■■□□□ 1.45
CHRNB1-206ENST00000574054 KCNB2Q92953 911 aa24.1■■□□□ 1.45
CHRNB1-206ENST00000574054 HLA-CQ95604 372 aa24.1■■□□□ 1.45
CHRNB1-206ENST00000574054 FAM49AQ9H0Q0 323 aaPredicted RBP24.1■■□□□ 1.45
CHRNB1-206ENST00000574054 RRN3P2A6NIE6 340 aa24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 BMP1P13497 986 aa24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 SCG2P13521 617 aa24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 HSPA4P34932 840 aa24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 MGAT3Q09327 533 aa24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 ITGB3BPQ13352 177 aaPredicted RBP24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 LPIN1Q14693 890 aa24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 PFKFB3Q16875 520 aaPredicted RBP24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 SP7Q8TDD2 431 aaPredicted RBP24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 NECAB3Q96P71 396 aaPredicted RBP24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 CDY2AQ9Y6F7 541 aa24.09■■□□□ 1.45
CHRNB1-206ENST00000574054 DDX39AO00148 427 aaKnown RBP24.08■■□□□ 1.45
CHRNB1-206ENST00000574054 MEIS1O00470 390 aa24.08■■□□□ 1.45
CHRNB1-206ENST00000574054 CLK2P49760 499 aaKnown RBP24.08■■□□□ 1.45
CHRNB1-206ENST00000574054 PLCB4Q15147 1175 aa24.08■■□□□ 1.45
CHRNB1-206ENST00000574054 TNPO1Q92973 898 aaKnown RBP24.08■■□□□ 1.45
CHRNB1-206ENST00000574054 SIP14410 1827 aa24.07■■□□□ 1.44
CHRNB1-206ENST00000574054 TCF20Q9UGU0 1960 aaKnown RBP24.07■■□□□ 1.44
CHRNB1-206ENST00000574054 STAT5BP51692 787 aa24.07■■□□□ 1.44
CHRNB1-206ENST00000574054 MRPS6P82932 125 aaKnown RBP24.07■■□□□ 1.44
CHRNB1-206ENST00000574054 EPC2Q52LR7 807 aa24.07■■□□□ 1.44
CHRNB1-206ENST00000574054 PLA2G4DQ86XP0 818 aa24.07■■□□□ 1.44
CHRNB1-206ENST00000574054 TRAPPC12Q8WVT3 735 aa24.07■■□□□ 1.44
CHRNB1-206ENST00000574054 BRWD1Q9NSI6 2320 aa24.07■■□□□ 1.44
CHRNB1-206ENST00000574054 BACH1O14867 736 aa24.06■■□□□ 1.44
CHRNB1-206ENST00000574054 REC8O95072 547 aa24.06■■□□□ 1.44
CHRNB1-206ENST00000574054 RPS6KB1P23443 525 aa24.06■■□□□ 1.44
CHRNB1-206ENST00000574054 AKAP17AQ02040 695 aaKnown RBP24.06■■□□□ 1.44
CHRNB1-206ENST00000574054 FBXO47Q5MNV8 452 aa24.06■■□□□ 1.44
CHRNB1-206ENST00000574054 PLPPR4Q7Z2D5 763 aa24.06■■□□□ 1.44
CHRNB1-206ENST00000574054 CCDC12Q8WUD4 166 aaPredicted RBP24.06■■□□□ 1.44
CHRNB1-206ENST00000574054 SAMD11Q96NU1 681 aa24.06■■□□□ 1.44
CHRNB1-206ENST00000574054 UIMC1Q96RL1 719 aa24.06■■□□□ 1.44
CHRNB1-206ENST00000574054 C6orf50Q9HD87 102 aa24.06■■□□□ 1.44
CHRNB1-206ENST00000574054 M0QZ92 97 aa24.05■■□□□ 1.44
CHRNB1-206ENST00000574054 PPFIA3O75145 1194 aa24.05■■□□□ 1.44
CHRNB1-206ENST00000574054 TMEM62Q0P6H9 643 aa24.05■■□□□ 1.44
CHRNB1-206ENST00000574054 IER5Q5VY09 327 aa24.05■■□□□ 1.44
CHRNB1-206ENST00000574054 TSHZ1Q6ZSZ6 1077 aa24.05■■□□□ 1.44
CHRNB1-206ENST00000574054 NIPA1Q7RTP0 329 aa24.05■■□□□ 1.44
CHRNB1-206ENST00000574054 REXO1Q8N1G1 1221 aaKnown RBP24.05■■□□□ 1.44
CHRNB1-206ENST00000574054 PHKBQ93100 1093 aa24.05■■□□□ 1.44
CHRNB1-206ENST00000574054 IL17RAQ96F46 866 aa24.05■■□□□ 1.44
CHRNB1-206ENST00000574054 ESYT2A0FGR8 921 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 POTEB3A0JP26 581 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 FAM86B1E9PN63 330 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 CCNE2O96020 404 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 RPLP2P05387 115 aaKnown RBP24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 FAM86B2P0C5J1 330 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 PSMA5P28066 241 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 FAM160B1Q5W0V3 765 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 POTEBQ6S5H4 581 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 TMEM192Q8IY95 271 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 ZMYND12Q9H0C1 365 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 PCDHA2Q9Y5H9 948 aa24.04■■□□□ 1.44
CHRNB1-206ENST00000574054 ADAMTS3O15072 1205 aa24.03■■□□□ 1.44
CHRNB1-206ENST00000574054 PRPF3O43395 683 aaKnown RBP24.03■■□□□ 1.44
CHRNB1-206ENST00000574054 CD52P31358 61 aa24.03■■□□□ 1.44
CHRNB1-206ENST00000574054 GPM6BQ13491 265 aa24.03■■□□□ 1.44
CHRNB1-206ENST00000574054 PKN1Q16512 942 aa24.03■■□□□ 1.44
CHRNB1-206ENST00000574054 PTPROQ16827 1216 aa24.03■■□□□ 1.44
CHRNB1-206ENST00000574054 AGO3Q9H9G7 860 aaKnown RBP24.03■■□□□ 1.44
CHRNB1-206ENST00000574054 TRPV2Q9Y5S1 764 aa24.03■■□□□ 1.44
CHRNB1-206ENST00000574054 NID2Q14112 1375 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms