RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 SPATA20Q8TB22 786 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 HAUS1Q96CS2 278 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 PPP1R9AQ9ULJ8 1098 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 ARHGEF28Q8N1W1 1705 aaKnown RBP12.49□□□□□ -0.41
EDC4-207ENST00000573992 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
EDC4-207ENST00000573992 DLC1Q96QB1 1528 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 STAT1P42224 750 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 TECP42680 631 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 RFX5P48382 616 aaPredicted RBP12.49□□□□□ -0.41
EDC4-207ENST00000573992 COG7P83436 770 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 NAB2Q15742 525 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 NTRK3Q16288 839 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 C6orf89Q6UWU4 347 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
EDC4-207ENST00000573992 EZH1Q92800 747 aaPredicted RBP12.49□□□□□ -0.41
EDC4-207ENST00000573992 MRRFQ96E11 262 aaKnown RBP12.49□□□□□ -0.41
EDC4-207ENST00000573992 DYDC2Q96IM9 177 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 MED15Q96RN5 788 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 ABCF3Q9NUQ8 709 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 TBK1Q9UHD2 729 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 DENND2AQ9ULE3 1009 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
EDC4-207ENST00000573992 MROH1Q8NDA8 1641 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 ACSL3O95573 720 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 FESP07332 822 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 OR52Z1P0C646 297 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 BRAFP15056 766 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 CETN1Q12798 172 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 TMED1Q13445 227 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 HERC4Q5GLZ8 1057 aaPredicted RBP12.48□□□□□ -0.41
EDC4-207ENST00000573992 APTXQ7Z2E3 356 aaKnown RBP12.48□□□□□ -0.41
EDC4-207ENST00000573992 FAM81AQ8TBF8 368 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 PIGOQ8TEQ8 1089 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 ANKS1AQ92625 1134 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 GRAMD1AQ96CP6 724 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 STRBPQ96SI9 672 aaKnown RBP12.48□□□□□ -0.41
EDC4-207ENST00000573992 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 JCADQ9P266 1359 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 NEXMIFQ5QGS0 1516 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 A0A087X0B3 334 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 FAM170AA1A519 330 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 LRRC63Q05C16 580 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
EDC4-207ENST00000573992 SLC18A3Q16572 532 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 ERMARDQ5T6L9 678 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 KLHL23Q8NBE8 558 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 RASGRP4Q8TDF6 673 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 LPIN2Q92539 896 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 RIC8AQ9NPQ8 531 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 PTPN22Q9Y2R2 807 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 ATP2A1O14983 1001 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 RHOBTB3O94955 611 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 RNASELQ05823 741 aaKnown RBP12.48□□□□□ -0.41
EDC4-207ENST00000573992 NONOQ15233 471 aaKnown RBP eCLIP12.48□□□□□ -0.41
EDC4-207ENST00000573992 GSTA5Q7RTV2 222 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 SH3RF1Q7Z6J0 888 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 GIMAP8Q8ND71 665 aaPredicted RBP12.48□□□□□ -0.41
EDC4-207ENST00000573992 SNX29Q8TEQ0 813 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 SPZ1Q9BXG8 430 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 EBF2Q9HAK2 575 aa12.48□□□□□ -0.41
EDC4-207ENST00000573992 SMNDC1O75940 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
EDC4-207ENST00000573992 LRRC41Q15345 812 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 ARMC3Q5W041 872 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 ATG9AQ7Z3C6 839 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 SPATA5Q8NB90 893 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 HIC2Q96JB3 615 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 MIS12Q9H081 205 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 RTN3O95197 1032 aaPredicted RBP12.47□□□□□ -0.41
EDC4-207ENST00000573992 HNRNPCP07910 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
EDC4-207ENST00000573992 ITGA6P23229 1130 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 RPL13P26373 211 aaKnown RBP12.47□□□□□ -0.41
EDC4-207ENST00000573992 SLC4A8Q2Y0W8 1093 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 AK8Q96MA6 479 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 CELF4Q9BZC1 486 aaKnown RBP12.47□□□□□ -0.41
EDC4-207ENST00000573992 IQCGQ9H095 443 aaKnown RBP12.47□□□□□ -0.41
EDC4-207ENST00000573992 HDAC9Q9UKV0 1011 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 F8VZ95 297 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 PLEKHA8P1O95397 391 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 GAS8O95995 478 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 CDR2Q01850 454 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 NME8Q8N427 588 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 SLC17A8Q8NDX2 589 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 ERP27Q96DN0 273 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 ARMCX3Q9UH62 379 aaPredicted RBP12.47□□□□□ -0.41
EDC4-207ENST00000573992 SERPINA10Q9UK55 444 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 DBR1Q9UK59 544 aaKnown RBP12.47□□□□□ -0.41
EDC4-207ENST00000573992 ANGPTL2Q9UKU9 493 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 IKBKGQ9Y6K9 419 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 ALKQ9UM73 1620 aa12.47□□□□□ -0.41
EDC4-207ENST00000573992 DIP2CQ9Y2E4 1556 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 PP2D1A8MPX8 630 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 PODXLO00592 558 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 HSPA6P17066 643 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 SLC29A2Q14542 456 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 KRT25Q7Z3Z0 450 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 EIF1ADQ8N9N8 165 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms