RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 BARHL2Q9NY43 387 aa16.35■□□□□ 0.21
TVP23A-208ENST00000573857 SLC9A2Q9UBY0 812 aa16.35■□□□□ 0.21
TVP23A-208ENST00000573857 SIP14410 1827 aa16.35■□□□□ 0.21
TVP23A-208ENST00000573857 BRWD1Q9NSI6 2320 aa16.35■□□□□ 0.21
TVP23A-208ENST00000573857 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
TVP23A-208ENST00000573857 KLF18A0A0U1RQI7 1052 aa16.34■□□□□ 0.21
TVP23A-208ENST00000573857 UPP2O95045 317 aa16.34■□□□□ 0.21
TVP23A-208ENST00000573857 FOSP01100 380 aaPredicted RBP16.34■□□□□ 0.21
TVP23A-208ENST00000573857 HMGB1P09429 215 aaKnown RBP16.34■□□□□ 0.21
TVP23A-208ENST00000573857 RCAN1P53805 252 aa16.34■□□□□ 0.21
TVP23A-208ENST00000573857 SAMD11Q96NU1 681 aa16.34■□□□□ 0.21
TVP23A-208ENST00000573857 SDF4Q9BRK5 362 aa16.34■□□□□ 0.21
TVP23A-208ENST00000573857 ANO3Q9BYT9 981 aa16.34■□□□□ 0.21
TVP23A-208ENST00000573857 SMCO2A6NFE2 343 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 RRN3P2A6NIE6 340 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 CDC27P30260 824 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 SREBF1P36956 1147 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 IGBP1P78318 339 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 LPIN1Q14693 890 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 EPC2Q52LR7 807 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 CEP55Q53EZ4 464 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 DNAJB3Q8WWF6 145 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 GLT8D2Q9H1C3 349 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 AZI2Q9H6S1 392 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 PPP4R2Q9NY27 417 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 NFASCO94856 1347 aa16.33■□□□□ 0.2
TVP23A-208ENST00000573857 MEIS1O00470 390 aa16.32■□□□□ 0.2
TVP23A-208ENST00000573857 ARP10275 920 aa16.32■□□□□ 0.2
TVP23A-208ENST00000573857 INSRRP14616 1297 aa16.32■□□□□ 0.2
TVP23A-208ENST00000573857 CLK2P49760 499 aaKnown RBP16.32■□□□□ 0.2
TVP23A-208ENST00000573857 ACTR2P61160 394 aa16.32■□□□□ 0.2
TVP23A-208ENST00000573857 ITGB3BPQ13352 177 aaPredicted RBP16.32■□□□□ 0.2
TVP23A-208ENST00000573857 AP3B2Q13367 1082 aa16.32■□□□□ 0.2
TVP23A-208ENST00000573857 FBXO47Q5MNV8 452 aa16.32■□□□□ 0.2
TVP23A-208ENST00000573857 ZBTB10Q96DT7 871 aa16.32■□□□□ 0.2
TVP23A-208ENST00000573857 MRPL38Q96DV4 380 aaKnown RBP16.32■□□□□ 0.2
TVP23A-208ENST00000573857 AGO4Q9HCK5 861 aaKnown RBP16.32■□□□□ 0.2
TVP23A-208ENST00000573857 TMEM260Q9NX78 707 aa16.32■□□□□ 0.2
TVP23A-208ENST00000573857 TCF20Q9UGU0 1960 aaKnown RBP16.32■□□□□ 0.2
TVP23A-208ENST00000573857 TRPC6Q9Y210 931 aa16.32■□□□□ 0.2
TVP23A-208ENST00000573857 CDY2AQ9Y6F7 541 aa16.32■□□□□ 0.2
TVP23A-208ENST00000573857 RPLP2P05387 115 aaKnown RBP16.31■□□□□ 0.2
TVP23A-208ENST00000573857 MRPS6P82932 125 aaKnown RBP16.31■□□□□ 0.2
TVP23A-208ENST00000573857 PLCB4Q15147 1175 aa16.31■□□□□ 0.2
TVP23A-208ENST00000573857 TSHZ1Q6ZSZ6 1077 aa16.31■□□□□ 0.2
TVP23A-208ENST00000573857 PLPPR4Q7Z2D5 763 aa16.31■□□□□ 0.2
TVP23A-208ENST00000573857 TMEM192Q8IY95 271 aa16.31■□□□□ 0.2
TVP23A-208ENST00000573857 KCNB2Q92953 911 aa16.31■□□□□ 0.2
TVP23A-208ENST00000573857 TNPO1Q92973 898 aaKnown RBP16.31■□□□□ 0.2
TVP23A-208ENST00000573857 IL17RAQ96F46 866 aa16.31■□□□□ 0.2
TVP23A-208ENST00000573857 UBE2ZQ9H832 354 aaPredicted RBP16.31■□□□□ 0.2
TVP23A-208ENST00000573857 NAP1L2Q9ULW6 460 aaPredicted RBP16.31■□□□□ 0.2
TVP23A-208ENST00000573857 KAT6AQ92794 2004 aa16.31■□□□□ 0.2
TVP23A-208ENST00000573857 CCDC196A0A1B0GTZ2 297 aa16.3■□□□□ 0.2
TVP23A-208ENST00000573857 H3BNC9 293 aa16.3■□□□□ 0.2
TVP23A-208ENST00000573857 ATG7O95352 703 aa16.3■□□□□ 0.2
TVP23A-208ENST00000573857 CPA1P15085 419 aa16.3■□□□□ 0.2
TVP23A-208ENST00000573857 ADD1P35611 737 aaKnown RBP16.3■□□□□ 0.2
TVP23A-208ENST00000573857 METAP2P50579 478 aaKnown RBP eCLIP16.3■□□□□ 0.2
TVP23A-208ENST00000573857 STAT5BP51692 787 aa16.3■□□□□ 0.2
TVP23A-208ENST00000573857 FGD1P98174 961 aa16.3■□□□□ 0.2
TVP23A-208ENST00000573857 PTPROQ16827 1216 aa16.3■□□□□ 0.2
TVP23A-208ENST00000573857 PFKFB3Q16875 520 aaPredicted RBP16.3■□□□□ 0.2
TVP23A-208ENST00000573857 NIPA1Q7RTP0 329 aa16.3■□□□□ 0.2
TVP23A-208ENST00000573857 FAM49AQ9H0Q0 323 aaPredicted RBP16.3■□□□□ 0.2
TVP23A-208ENST00000573857 PCDHA2Q9Y5H9 948 aa16.3■□□□□ 0.2
TVP23A-208ENST00000573857 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.29■□□□□ 0.2
TVP23A-208ENST00000573857 ENPP3O14638 875 aa16.29■□□□□ 0.2
TVP23A-208ENST00000573857 SCG2P13521 617 aa16.29■□□□□ 0.2
TVP23A-208ENST00000573857 ZNF76P36508 570 aa16.29■□□□□ 0.2
TVP23A-208ENST00000573857 APOBRQ0VD83 1088 aa16.29■□□□□ 0.2
TVP23A-208ENST00000573857 GPM6BQ13491 265 aa16.29■□□□□ 0.2
TVP23A-208ENST00000573857 TIGD5Q53EQ6 642 aa16.29■□□□□ 0.2
TVP23A-208ENST00000573857 IER5Q5VY09 327 aa16.29■□□□□ 0.2
TVP23A-208ENST00000573857 Q6ZUG5 572 aa16.29■□□□□ 0.2
TVP23A-208ENST00000573857 TRAPPC12Q8WVT3 735 aa16.29■□□□□ 0.2
TVP23A-208ENST00000573857 BRF1Q92994 677 aa16.29■□□□□ 0.2
TVP23A-208ENST00000573857 JAKMIP1Q96N16 626 aaKnown RBP16.29■□□□□ 0.2
TVP23A-208ENST00000573857 AGO3Q9H9G7 860 aaKnown RBP16.29■□□□□ 0.2
TVP23A-208ENST00000573857 NID2Q14112 1375 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 ADGRA3Q8IWK6 1321 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 IGKV6D-21A0A0A0MT36 114 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 ESYT2A0FGR8 921 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 POTEB3A0JP26 581 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 FAM86B1E9PN63 330 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 CCNE2O96020 404 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 FAM86B2P0C5J1 330 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 LINC00271P0C7V0 271 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 CD52P31358 61 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 HSPA4P34932 840 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 SLC26A2P50443 739 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 JAKMIP3Q5VZ66 844 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 POTEBQ6S5H4 581 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 FIBCD1Q8N539 461 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 CRYGNQ8WXF5 182 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 RC3H2Q9HBD1 1191 aaKnown RBP16.28■□□□□ 0.2
TVP23A-208ENST00000573857 TRPV2Q9Y5S1 764 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 SNX14Q9Y5W7 946 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 SQORQ9Y6N5 450 aa16.28■□□□□ 0.2
TVP23A-208ENST00000573857 IGLV3-22A0A075B6J6 115 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms