RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 USP17L6PQ6QN14 398 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 HDAC9Q9UKV0 1011 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 NR2F2P24468 414 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 LSP1P33241 339 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 ERVK-9P63128 1117 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 PTPROQ16827 1216 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 EMC10Q5UCC4 262 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 FOCADQ5VW36 1801 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 TAF4BQ92750 862 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 RPGRQ92834 1020 aaKnown RBP20.91■□□□□ 0.94
SCARF1-206ENST00000573852 DDX4Q9NQI0 724 aaKnown RBP20.91■□□□□ 0.94
SCARF1-206ENST00000573852 FRMD3A2A2Y4 597 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 BTNL10A8MVZ5 291 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 ZBTB5O15062 677 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 KIF4AO95239 1232 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 NR1D1P20393 614 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 EDRF1Q3B7T1 1238 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 KRT18P05783 430 aaKnown RBP20.9■□□□□ 0.94
SCARF1-206ENST00000573852 SLC12A3P55017 1021 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 ATP6V1G3Q96LB4 118 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 TAF1DQ9H5J8 278 aaPredicted RBP20.9■□□□□ 0.94
SCARF1-206ENST00000573852 KCNMB3Q9NPA1 279 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 POLLQ9UGP5 575 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 PLAAQ9Y263 795 aa20.9■□□□□ 0.94
SCARF1-206ENST00000573852 POTEFA5A3E0 1075 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 POTEIP0CG38 1075 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 ECHS1P30084 290 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 HSPA9P38646 679 aaKnown RBP20.89■□□□□ 0.93
SCARF1-206ENST00000573852 POTEGQ6S5H5 508 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 POTEEQ6S8J3 1075 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 PROCA1Q8NCQ7 364 aaPredicted RBP20.89■□□□□ 0.93
SCARF1-206ENST00000573852 UCHL3P15374 230 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 INPP5BP32019 993 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 USP11P51784 963 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 PRR5LQ6MZQ0 368 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 LRRC57Q8N9N7 239 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 SCFD2Q8WU76 684 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 ISCUQ9H1K1 167 aa20.89■□□□□ 0.93
SCARF1-206ENST00000573852 DHX36Q9H2U1 1008 aaKnown RBP20.89■□□□□ 0.93
SCARF1-206ENST00000573852 CES2O00748 559 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 KCTD19Q17RG1 926 aaPredicted RBP20.88■□□□□ 0.93
SCARF1-206ENST00000573852 PPP4R3CPQ6ZMV5 832 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 RBM46Q8TBY0 533 aaKnown RBP20.88■□□□□ 0.93
SCARF1-206ENST00000573852 EPN3Q9H201 632 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 NAGPAQ9UK23 515 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 CEP104O60308 925 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 HOXD13P35453 343 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 PSMC6P62333 389 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 HLTFQ14527 1009 aaKnown RBP eCLIP20.88■□□□□ 0.93
SCARF1-206ENST00000573852 CEP85LQ5SZL2 805 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 MAATS1Q7Z4T9 603 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 DDX42Q86XP3 938 aaKnown RBP eCLIP20.88■□□□□ 0.93
SCARF1-206ENST00000573852 TBC1D22AQ8WUA7 517 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 SPAG5Q96R06 1193 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 PLCB1Q9NQ66 1216 aa20.88■□□□□ 0.93
SCARF1-206ENST00000573852 BTAF1O14981 1849 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 SLURP2P0DP57 97 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 ZBTB48P10074 688 aaPredicted RBP20.87■□□□□ 0.93
SCARF1-206ENST00000573852 PON1P27169 355 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 C10orf76Q5T2E6 689 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 B4GALNT4Q76KP1 1039 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 AP1M1Q9BXS5 423 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 ARMCX3Q9UH62 379 aaPredicted RBP20.87■□□□□ 0.93
SCARF1-206ENST00000573852 SWAP70Q9UH65 585 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 SHMT1P34896 483 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 GTF2IP78347 998 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 ITGB3BPQ13352 177 aaPredicted RBP20.87■□□□□ 0.93
SCARF1-206ENST00000573852 TRAPPC3LQ5T215 181 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 C1orf131Q8NDD1 294 aaKnown RBP20.87■□□□□ 0.93
SCARF1-206ENST00000573852 PBKQ96KB5 322 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 SERPINB13Q9UIV8 391 aa20.87■□□□□ 0.93
SCARF1-206ENST00000573852 PITPNM2Q9BZ72 1349 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 F8W031 263 aaPredicted RBP20.86■□□□□ 0.93
SCARF1-206ENST00000573852 PPP1R37O75864 691 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 AFPP02771 609 aaKnown RBP20.86■□□□□ 0.93
SCARF1-206ENST00000573852 GIT2Q14161 759 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 PTGISQ16647 500 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 GPATCH4Q5T3I0 446 aaKnown RBP20.86■□□□□ 0.93
SCARF1-206ENST00000573852 NAA35Q5VZE5 725 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 ALKBH5Q6P6C2 394 aaKnown RBP20.86■□□□□ 0.93
SCARF1-206ENST00000573852 FRMD5Q7Z6J6 570 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 TBC1D16Q8TBP0 767 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 ACTRT1Q8TDG2 376 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 AJAP1Q9UKB5 411 aaPredicted RBP20.86■□□□□ 0.93
SCARF1-206ENST00000573852 HMGB1P1B2RPK0 211 aaPredicted RBP20.86■□□□□ 0.93
SCARF1-206ENST00000573852 MEIS1O00470 390 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 HSD17B3P37058 310 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 MDH1P40925 334 aaKnown RBP20.86■□□□□ 0.93
SCARF1-206ENST00000573852 SEC24CP53992 1094 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 EXOC3L4Q17RC7 722 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 FAM182BQ5T319 152 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 MMS22LQ6ZRQ5 1243 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 CATSPER3Q86XQ3 398 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 TMBIM4Q9HC24 238 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 TRAF3IP3Q9Y228 551 aa20.86■□□□□ 0.93
SCARF1-206ENST00000573852 UAP1Q16222 522 aaPredicted RBP20.85■□□□□ 0.93
SCARF1-206ENST00000573852 KNOP1Q1ED39 458 aaKnown RBP20.85■□□□□ 0.93
SCARF1-206ENST00000573852 FBXW10Q5XX13 1052 aa20.85■□□□□ 0.93
SCARF1-206ENST00000573852 METTL13Q8N6R0 699 aa20.85■□□□□ 0.93
SCARF1-206ENST00000573852 OR2W6PQ8NHA6 318 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms