RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 PDLIM7Q9NR12 457 aa19.45■□□□□ 0.7
LITAF-212ENST00000573332 SAMM50Q9Y512 469 aa19.45■□□□□ 0.7
LITAF-212ENST00000573332 DOCK5Q9H7D0 1870 aa19.45■□□□□ 0.7
LITAF-212ENST00000573332 BACH1O14867 736 aa19.44■□□□□ 0.7
LITAF-212ENST00000573332 SMIM10L2AP0DMW4 78 aa19.44■□□□□ 0.7
LITAF-212ENST00000573332 SMIM10L2BP0DMW5 78 aa19.44■□□□□ 0.7
LITAF-212ENST00000573332 TXKP42681 527 aa19.44■□□□□ 0.7
LITAF-212ENST00000573332 NBR1Q14596 966 aa19.44■□□□□ 0.7
LITAF-212ENST00000573332 SPRYD3Q8NCJ5 442 aa19.44■□□□□ 0.7
LITAF-212ENST00000573332 TBX21Q9UL17 535 aa19.44■□□□□ 0.7
LITAF-212ENST00000573332 NRCAMQ92823 1304 aa19.44■□□□□ 0.7
LITAF-212ENST00000573332 IGSF9BQ9UPX0 1349 aa19.44■□□□□ 0.7
LITAF-212ENST00000573332 EML1O00423 815 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 KIAA0355O15063 1070 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 CHMP2AO43633 222 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 PRPHP41219 470 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 CHMP4BP1P59074 171 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 ADAM17P78536 824 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 PTGDRQ13258 359 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 PLCB4Q15147 1175 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 EPHA7Q15375 998 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 GDF6Q6KF10 455 aaPredicted RBP19.43■□□□□ 0.7
LITAF-212ENST00000573332 PDXDC2PQ6P474 469 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 TRPV6Q9H1D0 765 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 TRMT13Q9NUP7 481 aaKnown RBP19.43■□□□□ 0.7
LITAF-212ENST00000573332 GABBR1Q9UBS5 961 aa19.43■□□□□ 0.7
LITAF-212ENST00000573332 C17orf102A2RUQ5 167 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 HBP1O60381 514 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 GNAT1P11488 350 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 ATP4AP20648 1035 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 ATP2C1P98194 919 aaPredicted RBP19.42■□□□□ 0.7
LITAF-212ENST00000573332 PTGISQ16647 500 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 ATP8B4Q8TF62 1192 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 PPP1R13LQ8WUF5 828 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 ATP6V0A1Q93050 837 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 CTAGE1Q96RT6 745 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 TMEM39AQ9NV64 488 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 ALPK3Q96L96 1907 aa19.42■□□□□ 0.7
LITAF-212ENST00000573332 POTEB3A0JP26 581 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 TRIM43BA6NCK2 446 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 RRN3P2A6NIE6 340 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 BMP15O95972 392 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 ZSCAN22P10073 491 aaPredicted RBP19.41■□□□□ 0.7
LITAF-212ENST00000573332 MARK3P27448 753 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 FXR2P51116 673 aaKnown RBP eCLIP19.41■□□□□ 0.7
LITAF-212ENST00000573332 HIC1Q14526 733 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 POTEBQ6S5H4 581 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 SH3RF1Q7Z6J0 888 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 BBXQ8WY36 941 aaPredicted RBP19.41■□□□□ 0.7
LITAF-212ENST00000573332 TRIM43Q96BQ3 446 aaPredicted RBP19.41■□□□□ 0.7
LITAF-212ENST00000573332 FAM167AQ96KS9 214 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 SETD4Q9NVD3 440 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 PRKAG2Q9UGJ0 569 aa19.41■□□□□ 0.7
LITAF-212ENST00000573332 ZNF862O60290 1169 aa19.4■□□□□ 0.7
LITAF-212ENST00000573332 DKC1O60832 514 aaKnown RBP eCLIP19.4■□□□□ 0.7
LITAF-212ENST00000573332 P4HBP07237 508 aaKnown RBP19.4■□□□□ 0.7
LITAF-212ENST00000573332 INSRRP14616 1297 aa19.4■□□□□ 0.7
LITAF-212ENST00000573332 PSMC5P62195 406 aa19.4■□□□□ 0.7
LITAF-212ENST00000573332 PPFIA1Q13136 1202 aa19.4■□□□□ 0.7
LITAF-212ENST00000573332 PTK7Q13308 1070 aa19.4■□□□□ 0.7
LITAF-212ENST00000573332 PDIA5Q14554 519 aa19.4■□□□□ 0.7
LITAF-212ENST00000573332 ARL6IP4Q66PJ3 421 aaKnown RBP19.4■□□□□ 0.7
LITAF-212ENST00000573332 NCAPH2Q6IBW4 605 aa19.4■□□□□ 0.7
LITAF-212ENST00000573332 NEK9Q8TD19 979 aa19.4■□□□□ 0.7
LITAF-212ENST00000573332 LMBR1Q8WVP7 490 aa19.4■□□□□ 0.7
LITAF-212ENST00000573332 HSD17B14Q9BPX1 270 aa19.4■□□□□ 0.7
LITAF-212ENST00000573332 MBLAC1A4D2B0 266 aaPredicted RBP19.39■□□□□ 0.69
LITAF-212ENST00000573332 TECP42680 631 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 QARSP47897 775 aaKnown RBP19.39■□□□□ 0.69
LITAF-212ENST00000573332 RBL2Q08999 1139 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 GRIK4Q16099 956 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 UGCGQ16739 394 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 TMEM266Q2M3C6 531 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 ZNF484Q5JVG2 852 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 SERINC5Q86VE9 423 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 NRBP2Q9NSY0 501 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 ZMYND8Q9ULU4 1186 aaPredicted RBP19.39■□□□□ 0.69
LITAF-212ENST00000573332 CEP131Q9UPN4 1083 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 TRPC6Q9Y210 931 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 NOD1Q9Y239 953 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 COL1A2P08123 1366 aa19.39■□□□□ 0.69
LITAF-212ENST00000573332 H0YGN5 161 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 STBD1O95210 358 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 F13A1P00488 732 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 TIMP1P01033 207 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 OATP04181 439 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 CYP2C9P11712 490 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 ZNF200P98182 395 aaPredicted RBP19.38■□□□□ 0.69
LITAF-212ENST00000573332 PRKCEQ02156 737 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 SF3A1Q15459 793 aaKnown RBP19.38■□□□□ 0.69
LITAF-212ENST00000573332 XKR3Q5GH77 459 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 MARCH8Q5T0T0 291 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 C4orf19Q8IY42 314 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 CKAP2LQ8IYA6 745 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 IGSF22Q8N9C0 903 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 CAGE1Q8TC20 777 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 EIF2AK1Q9BQI3 630 aaKnown RBP19.38■□□□□ 0.69
LITAF-212ENST00000573332 NOC4LQ9BVI4 516 aaKnown RBP19.38■□□□□ 0.69
LITAF-212ENST00000573332 RAB34Q9BZG1 259 aa19.38■□□□□ 0.69
LITAF-212ENST00000573332 PRDM5Q9NQX1 630 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms