RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 BRPF3Q9ULD4 1205 aa12.62□□□□□ -0.39
ABR-220ENST00000573325 PCDHA6Q9UN73 950 aa12.62□□□□□ -0.39
ABR-220ENST00000573325 PCDHA8Q9Y5H6 950 aa12.62□□□□□ -0.39
ABR-220ENST00000573325 CNTNAP5Q8WYK1 1306 aa12.62□□□□□ -0.39
ABR-220ENST00000573325 TECTAO75443 2155 aa12.62□□□□□ -0.39
ABR-220ENST00000573325 ERICH2A1L162 156 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 H3BQ06 376 aaPredicted RBP12.61□□□□□ -0.39
ABR-220ENST00000573325 DHX15O43143 795 aaKnown RBP12.61□□□□□ -0.39
ABR-220ENST00000573325 UPP2O95045 317 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 CCNE2O96020 404 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 ARP10275 920 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 GNAT1P11488 350 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 INSRRP14616 1297 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 KIF5BP33176 963 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 GTF2F1P35269 517 aaKnown RBP eCLIP12.61□□□□□ -0.39
ABR-220ENST00000573325 SP4Q02446 784 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 GPM6BQ13491 265 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 SART3Q15020 963 aaKnown RBP12.61□□□□□ -0.39
ABR-220ENST00000573325 TMEM31Q5JXX7 168 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 WWC2Q6AWC2 1192 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 PTCRAQ6ISU1 281 aaPredicted RBP12.61□□□□□ -0.39
ABR-220ENST00000573325 RASEFQ8IZ41 740 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 DNAJB3Q8WWF6 145 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 YTHDC1Q96MU7 727 aaKnown RBP12.61□□□□□ -0.39
ABR-220ENST00000573325 YME1L1Q96TA2 773 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 LRRC2Q9BYS8 371 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 KCNH7Q9NS40 1196 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 ADGRA3Q8IWK6 1321 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 KDM3AQ9Y4C1 1321 aa12.61□□□□□ -0.39
ABR-220ENST00000573325 USP34Q70CQ2 3546 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 MEIS1O00470 390 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 MAFGO15525 162 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 RB1P06400 928 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 ATP4AP20648 1035 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 MARK3P27448 753 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 MCM5P33992 734 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 GNAQP50148 359 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 PPFIA1Q13136 1202 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 TSGA10IPQ3SY00 556 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 APOA5Q6Q788 366 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 TSHZ1Q6ZSZ6 1077 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 TMTC2Q8N394 836 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 GIMAP8Q8ND71 665 aaPredicted RBP12.6□□□□□ -0.39
ABR-220ENST00000573325 CTCFLQ8NI51 663 aaPredicted RBP12.6□□□□□ -0.39
ABR-220ENST00000573325 IL17RAQ96F46 866 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 MSLNLQ96KJ4 702 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 MXRA8Q9BRK3 442 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 ERAP1Q9NZ08 941 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 TUBE1Q9UJT0 475 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 ZNF215Q9UL58 517 aaPredicted RBP12.6□□□□□ -0.39
ABR-220ENST00000573325 CDY2AQ9Y6F7 541 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 SQORQ9Y6N5 450 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 NFASCO94856 1347 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 IGSF9BQ9UPX0 1349 aa12.6□□□□□ -0.39
ABR-220ENST00000573325 ZDBF2Q9HCK1 2354 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 RALGAPA2Q2PPJ7 1873 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 IGLV3-22A0A075B6J6 115 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 STXBP3O00186 592 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 MGEA5O60502 916 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 TBX10O75333 385 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 CD52P31358 61 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 MTMR1Q13613 665 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 PLCB4Q15147 1175 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 ADCK5Q3MIX3 580 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 TIGD5Q53EQ6 642 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 NLRX1Q86UT6 975 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 TRAPPC12Q8WVT3 735 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 TMEM40Q8WWA1 233 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 KCNB2Q92953 911 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 SMARCAD1Q9H4L7 1026 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 NSUN3Q9H649 340 aaKnown RBP12.59□□□□□ -0.39
ABR-220ENST00000573325 CDHR5Q9HBB8 845 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 ALG13Q9NP73 1137 aaKnown RBP12.59□□□□□ -0.39
ABR-220ENST00000573325 PLAGL2Q9UPG8 496 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 PCDHA2Q9Y5H9 948 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 MRPL42Q9Y6G3 142 aaKnown RBP12.59□□□□□ -0.39
ABR-220ENST00000573325 NLRC5Q86WI3 1866 aa12.59□□□□□ -0.39
ABR-220ENST00000573325 FAM86B1E9PN63 330 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 LINC01565O15544 149 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 MMP1P03956 469 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 ITGB1P05556 798 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 FAM86B2P0C5J1 330 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 CDC27P30260 824 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 IRS1P35568 1242 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 SREBF1P36956 1147 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 ACTR2P61160 394 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 IRX6P78412 446 aaPredicted RBP12.58□□□□□ -0.4
ABR-220ENST00000573325 MRPS6P82932 125 aaKnown RBP12.58□□□□□ -0.4
ABR-220ENST00000573325 ADAM15Q13444 863 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 SMAD2Q15796 467 aaKnown RBP12.58□□□□□ -0.4
ABR-220ENST00000573325 ABHD15Q6UXT9 468 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 PLPPR4Q7Z2D5 763 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 TEX2Q8IWB9 1127 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 KIAA0319LQ8IZA0 1049 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 CCDC82Q8N4S0 544 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 SPPL3Q8TCT6 385 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 CDHR1Q96JP9 859 aa12.58□□□□□ -0.4
ABR-220ENST00000573325 PGBD1Q96JS3 809 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms