RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 AGAP2Q99490 1192 aa5.22□□□□□ -1.57
ERCC4-204ENST00000573018 KCNJ15Q99712 375 aa5.22□□□□□ -1.57
ERCC4-204ENST00000573018 MATN2O00339 956 aa5.21□□□□□ -1.58
ERCC4-204ENST00000573018 NKRFO15226 690 aaKnown RBP eCLIP5.21□□□□□ -1.58
ERCC4-204ENST00000573018 HIBADHP31937 336 aaKnown RBP5.21□□□□□ -1.58
ERCC4-204ENST00000573018 DUSP8Q13202 625 aa5.21□□□□□ -1.58
ERCC4-204ENST00000573018 TOP3AQ13472 1001 aaPredicted RBP5.21□□□□□ -1.58
ERCC4-204ENST00000573018 TMCO4Q5TGY1 634 aa5.21□□□□□ -1.58
ERCC4-204ENST00000573018 USP53Q70EK8 1073 aa5.21□□□□□ -1.58
ERCC4-204ENST00000573018 ZNF627Q7L945 461 aa5.21□□□□□ -1.58
ERCC4-204ENST00000573018 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.21□□□□□ -1.58
ERCC4-204ENST00000573018 MRGPRGQ86SM5 289 aa5.21□□□□□ -1.58
ERCC4-204ENST00000573018 UHMK1Q8TAS1 419 aaKnown RBP5.21□□□□□ -1.58
ERCC4-204ENST00000573018 TLR9Q9NR96 1032 aa5.21□□□□□ -1.58
ERCC4-204ENST00000573018 ACOT7O00154 380 aa5.2□□□□□ -1.58
ERCC4-204ENST00000573018 SMAD7O15105 426 aaKnown RBP5.2□□□□□ -1.58
ERCC4-204ENST00000573018 GNAT1P11488 350 aa5.2□□□□□ -1.58
ERCC4-204ENST00000573018 MSX2P35548 267 aaPredicted RBP5.2□□□□□ -1.58
ERCC4-204ENST00000573018 FOXL1Q12952 345 aa5.2□□□□□ -1.58
ERCC4-204ENST00000573018 TBR1Q16650 682 aa5.2□□□□□ -1.58
ERCC4-204ENST00000573018 ZMAT1Q5H9K5 638 aa5.2□□□□□ -1.58
ERCC4-204ENST00000573018 MRM1Q6IN84 353 aaKnown RBP5.2□□□□□ -1.58
ERCC4-204ENST00000573018 SEC16BQ96JE7 1060 aa5.2□□□□□ -1.58
ERCC4-204ENST00000573018 PHF20Q9BVI0 1012 aa5.2□□□□□ -1.58
ERCC4-204ENST00000573018 GPR27Q9NS67 375 aa5.2□□□□□ -1.58
ERCC4-204ENST00000573018 REXO2Q9Y3B8 237 aaKnown RBP5.2□□□□□ -1.58
ERCC4-204ENST00000573018 DMRT1Q9Y5R6 373 aa5.2□□□□□ -1.58
ERCC4-204ENST00000573018 MRVI1Q9Y6F6 885 aa5.2□□□□□ -1.58
ERCC4-204ENST00000573018 CUTAO60888 179 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 DDAH1O94760 285 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 MAKP20794 623 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 GRK2P25098 689 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 GRK3P35626 688 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 SPIRE1Q08AE8 756 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 HNRNPA0Q13151 305 aaKnown RBP5.19□□□□□ -1.58
ERCC4-204ENST00000573018 DPY19L2P1Q6NXN4 242 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 NT5DC4Q86YG4 428 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 KCTD13Q8WZ19 329 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 CLIP3Q96DZ5 547 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 KIAA1683Q9H0B3 1180 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 ACTR10Q9NZ32 417 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 DSEQ9UL01 958 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 STRIP2Q9ULQ0 834 aa5.19□□□□□ -1.58
ERCC4-204ENST00000573018 KCTD1Q719H9 257 aa5.18□□□□□ -1.58
ERCC4-204ENST00000573018 MICAL1Q8TDZ2 1067 aa5.18□□□□□ -1.58
ERCC4-204ENST00000573018 IER2Q9BTL4 223 aa5.18□□□□□ -1.58
ERCC4-204ENST00000573018 SLC2A4RGQ9NR83 387 aa5.18□□□□□ -1.58
ERCC4-204ENST00000573018 PUF60Q9UHX1 559 aaKnown RBP5.18□□□□□ -1.58
ERCC4-204ENST00000573018 NUB1Q9Y5A7 615 aa5.18□□□□□ -1.58
ERCC4-204ENST00000573018 ARHGAP6O43182 974 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 RAMP2O60895 175 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 PDE6AP16499 860 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 RPS19P39019 145 aaKnown RBP5.17□□□□□ -1.58
ERCC4-204ENST00000573018 ADCY8P40145 1251 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 KCNQ1P51787 676 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 PPP2R2AP63151 447 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 MAP4K2Q12851 820 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 WDR72Q3MJ13 1102 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 KCNT2Q6UVM3 1135 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 PCSK4Q6UW60 755 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 LARP4Q71RC2 724 aaKnown RBP eCLIP5.17□□□□□ -1.58
ERCC4-204ENST00000573018 SGMS1Q86VZ5 419 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 SCYL1Q96KG9 808 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 CD244Q9BZW8 370 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 PLA2G3Q9NZ20 509 aa5.17□□□□□ -1.58
ERCC4-204ENST00000573018 DLX3O60479 287 aa5.16□□□□□ -1.58
ERCC4-204ENST00000573018 HMGCRP04035 888 aa5.16□□□□□ -1.58
ERCC4-204ENST00000573018 CAPNS1P04632 268 aa5.16□□□□□ -1.58
ERCC4-204ENST00000573018 DNAJA1P31689 397 aaKnown RBP5.16□□□□□ -1.58
ERCC4-204ENST00000573018 ETV4P43268 484 aa5.16□□□□□ -1.58
ERCC4-204ENST00000573018 HDLBPQ00341 1268 aaKnown RBP5.16□□□□□ -1.58
ERCC4-204ENST00000573018 DPP8Q6V1X1 898 aaPredicted RBP5.16□□□□□ -1.58
ERCC4-204ENST00000573018 CFHR4Q92496 578 aa5.16□□□□□ -1.58
ERCC4-204ENST00000573018 TTPALQ9BTX7 342 aa5.16□□□□□ -1.58
ERCC4-204ENST00000573018 PDGFDQ9GZP0 370 aaPredicted RBP5.16□□□□□ -1.58
ERCC4-204ENST00000573018 WDR26Q9H7D7 661 aa5.16□□□□□ -1.58
ERCC4-204ENST00000573018 CEP72Q9P209 647 aa5.16□□□□□ -1.58
ERCC4-204ENST00000573018 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.15□□□□□ -1.59
ERCC4-204ENST00000573018 LMO1P25800 156 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 EPHA5P54756 1037 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 DBPQ10586 325 aaPredicted RBP5.15□□□□□ -1.59
ERCC4-204ENST00000573018 FSTL1Q12841 308 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 NFYCQ13952 458 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 KIZQ2M2Z5 673 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 HABP4Q5JVS0 413 aaKnown RBP5.15□□□□□ -1.59
ERCC4-204ENST00000573018 LBX2Q6XYB7 198 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 TMEM176AQ96HP8 235 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 ACBD3Q9H3P7 528 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 ARHGAP28Q9P2N2 729 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 HECAQ9UBI9 543 aaPredicted RBP5.15□□□□□ -1.59
ERCC4-204ENST00000573018 CDC42EP3Q9UKI2 254 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 INPP5FQ9Y2H2 1132 aa5.15□□□□□ -1.59
ERCC4-204ENST00000573018 A0A1W2PQU0 124 aa5.14□□□□□ -1.59
ERCC4-204ENST00000573018 CAPN14A8MX76 684 aa5.14□□□□□ -1.59
ERCC4-204ENST00000573018 KRT4P19013 534 aa5.14□□□□□ -1.59
ERCC4-204ENST00000573018 IL13RA1P78552 427 aa5.14□□□□□ -1.59
ERCC4-204ENST00000573018 HHEXQ03014 270 aa5.14□□□□□ -1.59
ERCC4-204ENST00000573018 GRM7Q14831 915 aa5.14□□□□□ -1.59
ERCC4-204ENST00000573018 SLC10A6Q3KNW5 377 aa5.14□□□□□ -1.59
ERCC4-204ENST00000573018 USP30Q70CQ3 517 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms