RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 GABPAQ06546 454 aa11.08□□□□□ -0.64
CIITA-208ENST00000572665 CACNB2Q08289 660 aaPredicted RBP11.08□□□□□ -0.64
CIITA-208ENST00000572665 RAD51AP2Q09MP3 1159 aa11.08□□□□□ -0.64
CIITA-208ENST00000572665 ZNF423Q2M1K9 1284 aa11.08□□□□□ -0.64
CIITA-208ENST00000572665 SHROOM1Q2M3G4 852 aaPredicted RBP11.08□□□□□ -0.64
CIITA-208ENST00000572665 ERMP1Q7Z2K6 904 aa11.08□□□□□ -0.64
CIITA-208ENST00000572665 C7orf61Q8IZ16 206 aa11.08□□□□□ -0.64
CIITA-208ENST00000572665 GPATCH3Q96I76 525 aa11.08□□□□□ -0.64
CIITA-208ENST00000572665 TANGO6Q9C0B7 1094 aa11.08□□□□□ -0.64
CIITA-208ENST00000572665 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
CIITA-208ENST00000572665 GGT7Q9UJ14 662 aa11.08□□□□□ -0.64
CIITA-208ENST00000572665 CEP290O15078 2479 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 CELA3AP09093 270 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 HOXC6P09630 235 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 HOXB4P17483 251 aaPredicted RBP11.07□□□□□ -0.64
CIITA-208ENST00000572665 ADD2P35612 726 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 DGKGP49619 791 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 SEPT2Q15019 361 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 UBE3CQ15386 1083 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 LRRFIP1Q32MZ4 808 aaKnown RBP11.07□□□□□ -0.64
CIITA-208ENST00000572665 DPP9Q86TI2 863 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 SHCBP1Q8NEM2 672 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 DIS3LQ8TF46 1054 aaKnown RBP11.07□□□□□ -0.64
CIITA-208ENST00000572665 SDR42E1Q8WUS8 393 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 HAUS7Q99871 368 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 LRRCC1Q9C099 1032 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 PRO3102Q9H379 93 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 BOLA2Q9H3K6 86 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 MROH8Q9H579 483 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 FRMPD3Q5JV73 1810 aa11.07□□□□□ -0.64
CIITA-208ENST00000572665 BAZ2AQ9UIF9 1905 aaKnown RBP11.06□□□□□ -0.64
CIITA-208ENST00000572665 TCRBV5S4A2TA0A5A2 114 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 CNGA1P29973 690 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 ICA1Q05084 483 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 COL9A3Q14050 684 aaPredicted RBP11.06□□□□□ -0.64
CIITA-208ENST00000572665 IKBKEQ14164 716 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 GRB14Q14449 540 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 WFDC8Q8IUA0 241 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 LCORLQ8N3X6 602 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 ACER1Q8TDN7 264 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 TRIM56Q9BRZ2 755 aaKnown RBP11.06□□□□□ -0.64
CIITA-208ENST00000572665 ARMT1Q9H993 441 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 TMEM39AQ9NV64 488 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 PPME1Q9Y570 386 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 ZNF236Q9UL36 1845 aa11.06□□□□□ -0.64
CIITA-208ENST00000572665 WDR46O15213 610 aaKnown RBP11.05□□□□□ -0.64
CIITA-208ENST00000572665 CNMDO75829 334 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 FLOT1O75955 427 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 MBD4O95243 580 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 NID1P14543 1247 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 CCND3P30281 292 aaPredicted RBP11.05□□□□□ -0.64
CIITA-208ENST00000572665 COPB2P35606 906 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 PLS1Q14651 629 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 CCL14Q16627 93 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 OLFML2BQ68BL8 750 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 ABRAQ8N0Z2 381 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 SVOPQ8N4V2 548 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 ARRDC4Q8NCT1 418 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 RSRP1Q9BUV0 290 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 TGIF2Q9GZN2 237 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 SPATC1LQ9H0A9 340 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 KANSL2Q9H9L4 492 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 ZNF287Q9HBT7 754 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 BTBD7Q9P203 1132 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 ARPP21Q9UBL0 812 aaPredicted RBP11.05□□□□□ -0.64
CIITA-208ENST00000572665 PRKAG2Q9UGJ0 569 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 STAP2Q9UGK3 403 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 DDX20Q9UHI6 824 aaKnown RBP11.05□□□□□ -0.64
CIITA-208ENST00000572665 TMX2Q9Y320 296 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 SLC4A4Q9Y6R1 1079 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 TRIOBPQ9H2D6 2365 aa11.05□□□□□ -0.64
CIITA-208ENST00000572665 LINC01387J3KSC0 135 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 DNM1LO00429 736 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 SOX1O00570 391 aaPredicted RBP11.04□□□□□ -0.64
CIITA-208ENST00000572665 PEX10O60683 326 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 SLC25A27O95847 323 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 CDC25BP30305 580 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 GUCY1A2P33402 732 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 PPP2R3AQ06190 1150 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 ZNF394Q53GI3 561 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 C12orf60Q5U649 245 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 TXNDC11Q6PKC3 985 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 GDF15Q99988 308 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 LBHD1Q9BQE6 289 aaPredicted RBP11.04□□□□□ -0.64
CIITA-208ENST00000572665 VCPKMTQ9H867 229 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 ENAMQ9NRM1 1142 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 DDX41Q9UJV9 622 aaKnown RBP11.04□□□□□ -0.64
CIITA-208ENST00000572665 ZMYND8Q9ULU4 1186 aaPredicted RBP11.04□□□□□ -0.64
CIITA-208ENST00000572665 A0A0G2JMZ2 1700 aa11.04□□□□□ -0.64
CIITA-208ENST00000572665 A0A1W2PRG0 241 aa11.03□□□□□ -0.64
CIITA-208ENST00000572665 KBTBD13C9JR72 458 aa11.03□□□□□ -0.64
CIITA-208ENST00000572665 WIPF1O43516 503 aa11.03□□□□□ -0.64
CIITA-208ENST00000572665 PAGE1O75459 146 aa11.03□□□□□ -0.64
CIITA-208ENST00000572665 ZFYP08048 801 aaPredicted RBP11.03□□□□□ -0.64
CIITA-208ENST00000572665 COL6A1P12109 1028 aa11.03□□□□□ -0.64
CIITA-208ENST00000572665 FCER1AP12319 257 aa11.03□□□□□ -0.64
CIITA-208ENST00000572665 ADORA2AP29274 412 aa11.03□□□□□ -0.64
CIITA-208ENST00000572665 CDK8P49336 464 aa11.03□□□□□ -0.64
CIITA-208ENST00000572665 GIMAP6Q6P9H5 292 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms