RNA–Protein interactions for RNA: ENST00000571932.2

CLDN7-205, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-205ENST00000571932 PRDM5Q9NQX1 630 aaPredicted RBP20.14■□□□□ 0.81
CLDN7-205ENST00000571932 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.14■□□□□ 0.81
CLDN7-205ENST00000571932 TMEM39AQ9NV64 488 aa20.14■□□□□ 0.81
CLDN7-205ENST00000571932 TNRC18O15417 2968 aaPredicted RBP20.14■□□□□ 0.81
CLDN7-205ENST00000571932 IGKV6D-21A0A0A0MT36 114 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 H0YGN5 161 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 LAD1O00515 517 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 B4GALT4O60513 344 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 ZSCAN22P10073 491 aaPredicted RBP20.13■□□□□ 0.81
CLDN7-205ENST00000571932 AFAP1L1Q8TED9 768 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 PCYT2Q99447 389 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 TRPV6Q9H1D0 765 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 HDAC6Q9UBN7 1215 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 GABBR1Q9UBS5 961 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 GTF2IRD1Q9UHL9 959 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 VAV3Q9UKW4 847 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 CEP131Q9UPN4 1083 aa20.13■□□□□ 0.81
CLDN7-205ENST00000571932 KIAA0355O15063 1070 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 BMP15O95972 392 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 MARK3P27448 753 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 TMEM266Q2M3C6 531 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 PRPF38BQ5VTL8 546 aaKnown RBP20.12■□□□□ 0.81
CLDN7-205ENST00000571932 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
CLDN7-205ENST00000571932 NCAPH2Q6IBW4 605 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 B3GNT9Q6UX72 402 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 CKAP2LQ8IYA6 745 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 C4orf32Q8N8J7 132 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
CLDN7-205ENST00000571932 RNPEPQ9H4A4 650 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 TRMT13Q9NUP7 481 aaKnown RBP20.12■□□□□ 0.81
CLDN7-205ENST00000571932 TBX21Q9UL17 535 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 ZMYND8Q9ULU4 1186 aaPredicted RBP20.12■□□□□ 0.81
CLDN7-205ENST00000571932 NOD1Q9Y239 953 aa20.12■□□□□ 0.81
CLDN7-205ENST00000571932 SMIM10L2AP0DMW4 78 aa20.11■□□□□ 0.81
CLDN7-205ENST00000571932 SMIM10L2BP0DMW5 78 aa20.11■□□□□ 0.81
CLDN7-205ENST00000571932 GNAT1P11488 350 aa20.11■□□□□ 0.81
CLDN7-205ENST00000571932 SYN1P17600 705 aa20.11■□□□□ 0.81
CLDN7-205ENST00000571932 EPHA7Q15375 998 aa20.11■□□□□ 0.81
CLDN7-205ENST00000571932 CCDC60Q8IWA6 550 aaPredicted RBP20.11■□□□□ 0.81
CLDN7-205ENST00000571932 PPP1R13LQ8WUF5 828 aa20.11■□□□□ 0.81
CLDN7-205ENST00000571932 TRPC6Q9Y210 931 aa20.11■□□□□ 0.81
CLDN7-205ENST00000571932 MAFBQ9Y5Q3 323 aaPredicted RBP20.11■□□□□ 0.81
CLDN7-205ENST00000571932 POTEB3A0JP26 581 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 C17orf102A2RUQ5 167 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 TRIM43BA6NCK2 446 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 EML1O00423 815 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 DKC1O60832 514 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLDN7-205ENST00000571932 PRPHP41219 470 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 TECP42680 631 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 PTGISQ16647 500 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 GDF6Q6KF10 455 aaPredicted RBP20.1■□□□□ 0.81
CLDN7-205ENST00000571932 POTEBQ6S5H4 581 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 DTHD1Q6ZMT9 781 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 SH3RF1Q7Z6J0 888 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 ATP6V0A1Q93050 837 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 TRIM43Q96BQ3 446 aaPredicted RBP20.1■□□□□ 0.81
CLDN7-205ENST00000571932 RAB34Q9BZG1 259 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 NRBP2Q9NSY0 501 aa20.1■□□□□ 0.81
CLDN7-205ENST00000571932 DNAH12Q6ZR08 3092 aa20.09■□□□□ 0.81
CLDN7-205ENST00000571932 NRCAMQ92823 1304 aa20.09■□□□□ 0.81
CLDN7-205ENST00000571932 P4HBP07237 508 aaKnown RBP20.09■□□□□ 0.81
CLDN7-205ENST00000571932 RAG1P15918 1043 aa20.09■□□□□ 0.81
CLDN7-205ENST00000571932 HOXC8P31273 242 aa20.09■□□□□ 0.81
CLDN7-205ENST00000571932 PSMC5P62195 406 aa20.09■□□□□ 0.81
CLDN7-205ENST00000571932 PPFIA1Q13136 1202 aa20.09■□□□□ 0.81
CLDN7-205ENST00000571932 PLCB4Q15147 1175 aa20.09■□□□□ 0.81
CLDN7-205ENST00000571932 FAM167AQ96KS9 214 aa20.09■□□□□ 0.81
CLDN7-205ENST00000571932 ZNF396Q96N95 335 aaPredicted RBP20.09■□□□□ 0.81
CLDN7-205ENST00000571932 LBHD1Q9BQE6 289 aaPredicted RBP20.09■□□□□ 0.81
CLDN7-205ENST00000571932 RRN3P2A6NIE6 340 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 HBP1O60381 514 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 F13A1P00488 732 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 QARSP47897 775 aaKnown RBP20.08■□□□□ 0.81
CLDN7-205ENST00000571932 ATP2C1P98194 919 aaPredicted RBP20.08■□□□□ 0.81
CLDN7-205ENST00000571932 SPIRE1Q08AE8 756 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 PDIA5Q14554 519 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 SF3A1Q15459 793 aaKnown RBP20.08■□□□□ 0.81
CLDN7-205ENST00000571932 FAM173BQ6P4H8 233 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 TRMT1LQ7Z2T5 733 aaKnown RBP20.08■□□□□ 0.81
CLDN7-205ENST00000571932 CCDC155Q8N6L0 562 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 ERMNQ8TAM6 284 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 ATP8B4Q8TF62 1192 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 HIPK3Q9H422 1215 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 SETD4Q9NVD3 440 aa20.08■□□□□ 0.81
CLDN7-205ENST00000571932 IGSF9BQ9UPX0 1349 aa20.07■□□□□ 0.8
CLDN7-205ENST00000571932 TIMP1P01033 207 aa20.07■□□□□ 0.8
CLDN7-205ENST00000571932 INSRRP14616 1297 aa20.07■□□□□ 0.8
CLDN7-205ENST00000571932 FXR2P51116 673 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLDN7-205ENST00000571932 PKP1Q13835 747 aa20.07■□□□□ 0.8
CLDN7-205ENST00000571932 ARL6IP4Q66PJ3 421 aaKnown RBP20.07■□□□□ 0.8
CLDN7-205ENST00000571932 BANK1Q8NDB2 785 aa20.07■□□□□ 0.8
CLDN7-205ENST00000571932 NEK9Q8TD19 979 aa20.07■□□□□ 0.8
CLDN7-205ENST00000571932 BBXQ8WY36 941 aaPredicted RBP20.07■□□□□ 0.8
CLDN7-205ENST00000571932 EIF2AK1Q9BQI3 630 aaKnown RBP20.07■□□□□ 0.8
CLDN7-205ENST00000571932 NOC4LQ9BVI4 516 aaKnown RBP20.07■□□□□ 0.8
CLDN7-205ENST00000571932 STK24Q9Y6E0 443 aa20.07■□□□□ 0.8
CLDN7-205ENST00000571932 CEP290O15078 2479 aa20.06■□□□□ 0.8
CLDN7-205ENST00000571932 BRD1O95696 1058 aa20.06■□□□□ 0.8
CLDN7-205ENST00000571932 CYP2C9P11712 490 aa20.06■□□□□ 0.8
CLDN7-205ENST00000571932 ATP4AP20648 1035 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms